Tableau information
Concept source: d1mjjb1 amino acid (a.a.) range (GLY8)(VAL111)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY8) (LYS13) E1
(ALA16) (GLY26) E2
(ASN35) (ARG40) E3
(GLY44) (GLY53) E4
(TYR56) (ASN60) E5
(ASN60) (LYS66) H6
(LYS66) (ASP72) E7
(ALA78) (SER82) E8
(ALA88) (GLY97) E9
(TRP98) (VAL111) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 166.1° E2
E3 -63.9° 129.9° E3
E4 103.2° -63.5° 155.8° E4
E5 -68.8° 123.9° -25.8° -170.3° E5
H6 57.3° -117.6° 85.7° -70.3° 108.0° H6
E7 132.5° -37.9° 139.3° -35.9° 153.8° -80.6° E7
E8 -20.3° 171.8° -45.6° 123.5° -48.6° 70.3° 150.3° E8
E9 136.5° -31.8° 152.4° -50.4° 131.7° -120.2° -48.0° 147.7° E9
E10 -36.8° 150.8° -42.4° 115.0° -62.3° 45.9° 122.8° -33.6° 165.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1tzib1 : (VAL2) (GLN105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Engineered (including hybrid species)
d4h0ga1 : (GLY9) (VAL118) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3esuf2 : (LEU1004) (GLN1105) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1nmah_ : (GLY8) (VAL111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1mjjb1 : (GLY8) (VAL111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1i85a_ : (MET0) (ALA109) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD86 (b7-2), N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1a6vi_ : (GLY308) (GLN412) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d3et9f2 : (GLN1003) (SER1112) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2uudh1 : (VAL2) (GLN105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 1 [TaxId: 10090]
d1dzba1 : (ALA9) (GLY107) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
d1aifb1 : (VAL2) (GLN113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 1 [TaxId: 10090]
d1fskc1 : (GLY8) (VAL116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d2cjuh_ : (VAL2) (GLN105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2arjb1 : (GLY10) (ALA111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1hysd1 : (THR3) (GLN115) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 6 [TaxId: 10090]
d1t04b1 : (GLY8) (GLN109) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Engineered (including hybrid species)
d1mh5b1 : (GLY8) (GLY104) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1bgxh1 : (GLY10) (VAL113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1