Protein Concepts Dictionary

Tableau information

Concept source:  d1mvqa_  amino acid (a.a.) range (VAL7)(LEU115)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL7)   (THR11) E1
	   (GLY26)   (LYS30) E2
	   (LYS35)   (ARG39) E3
	   (GLY48)   (SER56) E4
	   (LEU61)   (SER66) E5
	   (SER72)   (ASP78) E6
	   (ASP80)   (LEU85) H7
	   (TRP88)   (LEU99) E8
	  (TYR100)  (ILE106) E9
	  (LEU107)  (LEU115) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      124.5°   E2                                                             
E3      -42.0° -160.7°   E3                                                      
E4      154.4°  -48.4°  150.7°   E4                                               
E5      -36.9°  146.4°  -14.4°  163.2°   E5                                        
E6      139.5°  -32.1°  166.5°  -20.1°  176.3°   E6                                 
H7       78.2°   51.1° -109.9°  -99.4°  -96.2°   81.6°   H7                          
E8      -10.0°  118.3°  -50.4°  144.5°  -46.6°  129.8°   76.1°   E8                   
E9      139.0°  -84.5°  101.2°  -66.2°  102.7°  -80.9° -108.9° -149.0°   E9            
E10     158.6°  -54.4°  144.2°   -7.3°  156.0°  -27.4° -105.4°  149.3°  -60.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bjqb_ :   (GLN118)  (PRO234)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]
 d3u4xa_ :     (VAL5)  (SER108)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Camptosema pedicellatum [TaxId: 232302]
 d1ioaa_ :   (ARG118)  (PHE227)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Phytohemagglutinin-L, PHA-L, also arcelin |French bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]
 d1dgla_ :     (VAL7)  (LEU115)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Mucana (Dioclea grandiflora) [TaxId: 3837]
 d3zyrb_ :   (VAL136)  (LEU246)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Platypodium elegans [TaxId: 115002]
 d1faya_ :   (VAL122)  (GLN235)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]
 d1mvqa_ :     (VAL7)  (LEU115)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cratylia mollis, isoform 1 [TaxId: 252530]
 d2je9a_ :     (MET2)  (SER110)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Mucana (Dioclea grandiflora) [TaxId: 3837]
 d2jeca_ :     (MET2)  (SER110)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Mucana (Dioclea grandiflora) [TaxId: 3837]
 d2gdfb_ :     (VAL7)  (ASN118)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Dioclea violacea [TaxId: 192415]
 d2je7a_ :     (VAL9)  (LEU117)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Duke (Dioclea guianensis) [TaxId: 99571]
 d1f9ka_ :   (ASN118)  (LEU234)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29