Protein Concepts Dictionary

Tableau information

Concept source:  d1luqa_  amino acid (a.a.) range (GLY1019)(LYS1132)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (GLY1019) (ASN1023) E1
	 (GLY1026) (ALA1035) E2
	 (GLY1037) (VAL1047) E3
	 (TYR1054) (ALA1063) E4
	 (ALA1072) (ALA1078) E5
	 (SER1088) (GLY1099) E6
	 (ALA1102) (GLY1113) E7
	 (THR1115) (ALA1119) H8
	 (ALA1119) (SER1122) H9
	 (SER1122) (LYS1132) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      145.1°   E2                                                             
E3      -38.1°  174.8°   E3                                                      
E4      109.2°  -48.7°  136.4°   E4                                               
E5      -76.3°  119.3°  -55.8°  165.4°   E5                                        
E6      112.9°  -69.4°  114.1°  -39.8°  151.4°   E6                                 
E7      -66.2°  105.8°  -71.3°  131.2°  -37.6°  170.9°   E7                          
H8       82.9°  -80.9°  104.2°  -32.3°  158.7°   37.9° -135.0°   H8                   
H9      120.9°  -59.8°  123.6°  -34.9°  153.1°    9.7° -164.1°  -41.6°   H9            
E10     125.0°  -75.9°  105.2°  -67.0°  121.6°  -30.6°  157.6°  -67.4°  -32.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1i9ha_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d3rdxa_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |automated matches |Streptomyces avidinii [TaxId: 1895]
 d3rdxb_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |automated matches |Streptomyces avidinii [TaxId: 1895]
 d1n9mb_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d1kl3a_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d3ry1d_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d1kl4b_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d1luqa_ :  (GLY1019) (LYS1132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d1swjb_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d1n9md_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d1swjc_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
 d1kl5a_ :    (GLY19)  (LYS132)   [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.61