Tableau information
Concept source: d4grwe_ amino acid (a.a.) range (VAL2)(LYS117)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL2) (GLY8) E1
(GLY16) (GLY26) E2
(ALA35) (PRO41) E3
(GLU44) (GLY54) E4
(SER57) (ALA61) E5
(ARG67) (SER71) E6
(VAL79) (SER85) E7
(ARG87) (VAL93) H8
(TYR95) (THR101) E9
(ASP113) (LYS117) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.8° E2
E3 -55.8° 126.0° E3
E4 109.6° -64.7° 162.3° E4
E5 -59.8° 126.9° -15.0° -168.2° E5
E6 140.6° -26.0° 140.5° -43.4° 148.1° E6
E7 -24.9° 169.6° -47.4° 124.0° -44.2° 164.3° E7
H8 -141.0° 27.1° 103.6° -81.8° 109.6° -38.5° -150.4° H8
E9 144.1° -47.2° 140.5° -57.1° 127.6° -55.5° 130.5° 73.8° E9
E10 -39.2° 127.0° -49.6° 113.0° -62.9° 115.0° -57.2° -101.7° 169.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vyrh_ : (VAL2) (GLN116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4eigb_ : (GLN3) (GLY108) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
d3qnxb1 : (GLN3) (GLN111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cicd1 : (GLN3) (VAL114) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 5 [TaxId: 10090]
d1dsfh_ : (GLN3) (GLN105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
d4grwe_ : (VAL2) (LYS117) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama glama [TaxId: 9844]
d1y0lb1 : (VAL2) (LEU100) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Human (Homo sapiens), cluster 3 [TaxId: 9606]
d3p9wf_ : (VAL2) (GLY104) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p9wb_ : (GLU1) (GLY104) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1h3ph1 : (VAL2) (GLN105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
d1dfbh1 : (VAL2) (GLN118) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Human (Homo sapiens), cluster 3 [TaxId: 9606]
d2vyre_ : (VAL2) (GLN116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c5db1 : (LYS3) (VAL115) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3zhla_ : (VAL2) (GLN111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d43cab_ : (GLN3) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 5 [TaxId: 10090]
d4en3a1 : (GLN8) (GLY103) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p9wd_ : (VAL2) (GLY104) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gkza1 : (GLU9) (TRP116) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1kfai1 : (MET3) (GLN113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.1 [TaxId: 10090]
d1wz1h_ : (VAL2) (GLY112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1