Tableau information
Concept source: d3c6la1 amino acid (a.a.) range (GLN8)(VAL109)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN8) (VAL12) E1
(GLU16) (GLU25) E2
(ASP30) (PHE38) E3
(SER42) (PRO51) E4
(SER53) (GLU57) E5
(ARG60) (ASN66) E6
(LYS70) (ASP78) E7
(GLN80) (THR86) H8
(THR86) (ALA90) E9
(ARG98) (VAL109) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 158.6° E2
E3 -67.0° 134.3° E3
E4 90.6° -69.3° 153.9° E4
E5 -60.6° 131.8° -38.7° 140.0° E5
E6 135.4° -30.9° 144.2° -48.4° 162.7° E6
E7 -30.8° 165.4° -38.9° 121.1° -33.6° 163.7° E7
H8 -174.2° 23.9° 111.6° -89.4° 122.1° -42.8° -149.4° H8
E9 122.3° -36.5° 165.6° -40.2° 132.9° -38.2° 145.5° 60.3° E9
E10 -37.4° 157.6° -42.1° 111.8° -62.6° 133.1° -32.8° -137.8° 151.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3o4ld1 : (SER8) (VAL108) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bsed_ : (VAL2) (SER122) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
d3bdba_ : (HIS7) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d3vxta1 : (PRO10) (VAL108) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jguh1 : (VAL2) (VAL111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.1 [TaxId: 10090]
d1cdya1 : (LYS1) (GLN94) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD4 V-set domains |Human (Homo sapiens) [TaxId: 9606]
d1hnfa1 : (LEU7) (GLU104) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD2, first domain |Human (Homo sapiens) [TaxId: 9606]
d4janb1 : (PRO8) (GLY99) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fqcl1 : (ASP10) (GLY108) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hkfa_ : (GLN8) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |NK cell activating receptor NKP44 |Human (Homo sapiens) [TaxId: 9606]
d4r26l1 : (SER7) (SER107) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jy6a1 : (SER8) (GLY111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4tvpl1 : (ALA6) (LEU107) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3c6la1 : (GLN8) (VAL109) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain lambda variable domain, VL-lambda |Mouse (Mus musculus) [TaxId: 10090]
d2wbjc1 : (ALA10) (PRO112) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4lsul1 : (LEU4) (VAL106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fq2l1 : (PRO10) (VAL106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3jwdc1 : (LYS1002) (VAL1097) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD4 V-set domains |Human (Homo sapiens) [TaxId: 9606]
d4jy5l1 : (THR8) (VAL106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qa9a_ : (LEU7) (ARG105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD2, first domain |Human (Homo sapiens) [TaxId: 9606]
d4p9hc1 : (LYS2) (VAL97) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD4 V-set domains |Human (Homo sapiens) [TaxId: 9606]
d2or8a_ : (VAL5) (PRO111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1