Tableau information
Concept source: d3pmsa1 amino acid (a.a.) range (ASN5)(VAL134)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN5) (LYS10) E1
(ASP13) (PHE19) E2
(GLN25) (PRO34) E3
(LYS41) (ASN53) E4
(ARG61) (VAL67) E5
(GLU74) (TYR85) E6
(LEU96) (ASP102) E7
(PHE103) (SER108) H8
(THR111) (THR117) E9
(GLY124) (VAL134) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 46.1° E2
E3 145.3° -156.5° E3
E4 -35.2° -62.8° 140.1° E4
E5 119.7° 127.8° -34.4° 141.7° E5
E6 -74.7° -79.8° 120.3° -41.1° 152.1° E6
E7 116.9° 101.5° -55.9° 151.8° -31.4° 165.4° E7
H8 67.1° 110.2° -78.6° 75.4° 66.3° -103.2° -90.1° H8
E9 -57.6° -45.5° 151.1° -40.3° 173.2° -34.8° 142.4° -115.6° E9
E10 161.5° 138.9° -21.5° 156.2° -41.9° 121.8° -48.7° -98.9° 140.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1pgsa1 : (ASN5) (VAL134) [view usage] : b.121.1.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |PHM/PNGase F |Glycosyl-asparaginase |Peptide:N-glycosidase F, PNGase F |Flavobacterium meningosepticum [TaxId: 238]
d1pnfa1 : (ASN5) (VAL134) [view usage] : b.121.1.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |PHM/PNGase F |Glycosyl-asparaginase |Peptide:N-glycosidase F, PNGase F |Flavobacterium meningosepticum [TaxId: 238]
d3pmsa1 : (ASN5) (VAL134) [view usage] : b.121.1.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |PHM/PNGase F |Glycosyl-asparaginase |automated matches |Elizabethkingia meningoseptica [TaxId: 238]
d1pnga1 : (ASN5) (VAL134) [view usage] : b.121.1.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |PHM/PNGase F |Glycosyl-asparaginase |Peptide:N-glycosidase F, PNGase F |Flavobacterium meningosepticum [TaxId: 238]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121