Protein Concepts Dictionary

Tableau information

Concept source:  d1x99a_  amino acid (a.a.) range (SER4)(LYS111)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER4)   (ASN15) E1
	   (GLY19)   (ILE23) E2
	   (GLU25)   (PHE31) E3
	   (ASN33)   (GLU39) E4
	   (ALA43)   (GLY49) E5
	   (GLY52)   (THR62) E6
	   (ARG66)   (GLY72) E7
	   (LYS77)   (GLY85) E8
	   (THR91)  (ASN101) H9
	  (ASP106)  (LYS111) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2     -162.9°   E2                                                             
E3      152.5°  -43.4°   E3                                                      
E4      -37.7° -133.0°  157.2°   E4                                               
E5      155.2°   33.4°  -20.5°  166.3°   E5                                        
E6      -19.6°  143.3°  166.9°  -33.9°  153.3°   E6                                 
E7      149.7°  -44.2°  -32.2°  125.8°  -46.6°  159.6°   E7                          
E8      -38.3°  130.3°  137.2°  -64.9°  123.1°  -31.0°  169.4°   E8                   
H9      128.0°  -68.9°  -26.6°  139.6°  -45.3°  147.1°  -39.8°  133.0°   H9            
H10      99.7°  -88.8°  -80.5°   76.8°  -98.1°  108.5°  -51.8°  137.7°  -69.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xi0b_ :     (SER4)  (LYS111)   [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Xerocomus chrysenteron [TaxId: 5386]
 d3qdsa_ :     (THR1)  (LYS108)   [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Boletus edulis [TaxId: 36056]
 d1x99a_ :     (SER4)  (LYS111)   [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |Lectin xcl |Xerocomus chrysenteron [TaxId: 5386]
 d1xi0a_ :     (SER4)  (LYS111)   [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Xerocomus chrysenteron [TaxId: 5386]
 d2ofca_ :     (THR1)   (GLN98)   [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Athelia rolfsii [TaxId: 39291]
 d1y2ta_ :     (THR2)  (ASN109)   [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |TF antigen-binding lectin |Common mushroom (Agaricus bisporus) [TaxId: 5341]
 d1x99b_ :     (SER4)  (LYS111)   [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |Lectin xcl |Xerocomus chrysenteron [TaxId: 5386]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.97