Protein Concepts Dictionary

Tableau information

Concept source:  d1ytoa_  amino acid (a.a.) range (LYS10)(PRO136)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS10)   (CYS16) E1
	   (PHE22)   (ASP28) E2
	   (ASP32)   (ARG35) E3
	   (GLN43)   (ALA48) E4
	   (GLU53)   (SER58) E5
	   (GLY62)   (MET67) E6
	   (LEU84)   (LEU89) E7
	   (TYR94)   (SER99) E8
	  (HIS102)  (ASN106) H9
	  (LEU131)  (PRO136) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      105.0°   E2                                                             
E3      -86.2°  144.5°   E3                                                      
E4      102.1°   98.4° -112.3°   E4                                               
E5      -92.6°  -63.6°   82.7°  159.4°   E5                                        
E6       32.8°  109.2°  -98.3°  -69.3°  124.3°   E6                                 
E7       75.0° -166.1°  -22.5°  -95.1°  102.6°   78.5°   E7                          
E8      -91.8°   34.0° -176.8°   70.5°  -95.0°  -81.2°  158.4°   E8                   
H9       54.8°  153.1°  -34.0° -103.1°   97.1°   64.8°  -20.7°  144.8°   H9            
E10     149.9°  -79.2°   75.3° -106.9°   62.0° -171.0°  -94.0°  105.5° -109.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jt5a_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3oj2a_ :    (LYS25)  (PRO151)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1e0oc_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3ba7a_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3fjja_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1pzza_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3fjfa_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3baoa_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3baga_ :    (PRO11)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1jt4a_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1ytoa_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3fj8a_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1jt3a_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3ba5a_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1q03a_ :    (PRO11)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1jt7b_ :    (PRO11)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3baha_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1hknd_ :  (LYS4010) (PRO4136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1p63a_ :    (LYS10)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3fj9a_ :    (PRO11)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1jt7a_ :    (PRO11)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.42