Protein Concepts Dictionary

Tableau information

Concept source:  d1xjad_  amino acid (a.a.) range (HIS18)(ASP123)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (HIS18)   (ALA28) E1
	   (PHE34)   (LEU40) E2
	   (GLY44)   (THR50) E3
	   (GLY53)   (ASN59) E4
	   (ARG62)   (PRO68) E5
	   (ASP70)   (PRO75) E6
	   (GLU78)   (ARG84) E7
	   (ARG89)   (PHE98) E8
	  (TRP104)  (ASN109) H9
	  (THR117)  (ASP123) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2     -142.7°   E2                                                             
E3      -38.5° -153.5°   E3                                                      
E4      113.7°  -30.0° -142.1°   E4                                               
E5      -93.3°  123.2°  -61.5°  153.0°   E5                                        
E6      132.5°   29.6°  170.9°   32.2° -126.3°   E6                                 
E7      -32.9° -175.3°   23.9°  146.3°  -60.7° -151.6°   E7                          
E8      172.6°   32.1°  148.9°  -60.0°   93.1°  -40.1° -152.5°   E8                   
H9       27.4° -119.9°   47.8°  -95.5°  109.3° -124.2°   55.4° -150.8°   H9            
E10     -74.2°  130.2°  -35.8° -148.6°   36.5°  153.3°  -50.7°  113.2°   78.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2araa_ :    (GLY22)  (ASP123)   [view usage] : b.82.4.1 |Double-stranded beta-helix |Regulatory protein AraC |Regulatory protein AraC |Regulatory protein AraC |Escherichia coli [TaxId: 562]
 d2arcb_ :    (HIS18)  (ASP123)   [view usage] : b.82.4.1 |Double-stranded beta-helix |Regulatory protein AraC |Regulatory protein AraC |Regulatory protein AraC |Escherichia coli [TaxId: 562]
 d1xjac_ :    (HIS18)  (ASP123)   [view usage] : b.82.4.1 |Double-stranded beta-helix |Regulatory protein AraC |Regulatory protein AraC |Regulatory protein AraC |Escherichia coli [TaxId: 562]
 d1xjad_ :    (HIS18)  (ASP123)   [view usage] : b.82.4.1 |Double-stranded beta-helix |Regulatory protein AraC |Regulatory protein AraC |Regulatory protein AraC |Escherichia coli [TaxId: 562]
 d1xjaa_ :    (HIS18)  (ASP123)   [view usage] : b.82.4.1 |Double-stranded beta-helix |Regulatory protein AraC |Regulatory protein AraC |Regulatory protein AraC |Escherichia coli [TaxId: 562]
 d1xjab_ :    (HIS18)  (ASP123)   [view usage] : b.82.4.1 |Double-stranded beta-helix |Regulatory protein AraC |Regulatory protein AraC |Regulatory protein AraC |Escherichia coli [TaxId: 562]
 d2aaca_ :    (HIS18)  (ASP123)   [view usage] : b.82.4.1 |Double-stranded beta-helix |Regulatory protein AraC |Regulatory protein AraC |Regulatory protein AraC |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.82