Tableau information
Concept source: d1oaxh_ amino acid (a.a.) range (VAL2)(TYR102)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL2) (SER7) E1
(GLY8) (PRO14) E2
(ALA16) (GLY26) E3
(HIS35) (PRO41) E4
(GLY44) (ASN54) E5
(GLY55) (ASN61) E6
(LYS67) (ASP73) E7
(ALA79) (SER84) E8
(THR87) (VAL93) H9
(VAL93) (TYR102) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 39.8° E2
E3 157.9° -161.0° E3
E4 -57.4° -72.9° 120.3° E4
E5 112.2° 108.2° -63.5° 163.2° E5
E6 -69.2° -61.4° 121.7° -31.5° 163.2° E6
E7 126.2° 142.2° -37.4° 136.2° -36.2° 156.3° E7
E8 -27.4° -21.0° 171.1° -53.1° 124.8° -49.4° 151.3° E8
H9 -138.9° -176.4° 21.3° 103.5° -75.4° 115.2° -41.1° -155.8° H9
E10 151.4° 116.3° -44.8° 143.1° -52.2° 118.3° -58.5° 135.5° 66.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4krmb_ : (GLN1) (ALA100) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
d2gkia1 : (VAL24) (ARG120) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1orsb1 : (VAL2) (CYS96) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
d1fnsh1 : (VAL216) (ASP315) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 5 [TaxId: 10090]
d1ap2d_ : (GLN3) (GLU100) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
d2z31a_ : (ASP1) (TYR100) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3gm0a1 : (GLU9) (ASP107) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1mf2h1 : (VAL2) (GLU99) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
d4odxa_ : (GLN1) (THR98) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zglp1 : (VAL4) (LEU96) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d2xtjd_ : (GLN3) (TYR107) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rgva1 : (ASP1) (SER93) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ymme1 : (GLY1) (ARG97) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d1dqjb1 : (GLU1) (SER97) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d1wc7b1 : (VAL2) (ARG94) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 1 [TaxId: 10090]
d1tjgh1 : (ILE2) (PRO98) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Engineered (including hybrid species)
d1etzb1 : (VAL2) (TYR105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 6 [TaxId: 10090]
d2dtgd1 : (ASP1) (GLN90) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d4ozhe1 : (MET2) (GLY109) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nfda1 : (ASP1) (GLY99) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
d1f58h1 : (ASP1) (ALA97) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1