Protein Concepts Dictionary

Tableau information

Concept source:  d1ew3a_  amino acid (a.a.) range (ARG57)(THR171)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG57)   (ASP61) E1
	   (ASP61)   (ALA65) E2
	   (SER69)   (LYS78) E3
	   (GLU82)   (LYS92) E4
	   (GLY97)  (ASN102) E5
	  (VAL108)  (GLU113) E6
	  (GLU118)  (LYS129) E7
	  (ASP130)  (ARG141) E8
	  (PRO147)  (GLY161) H9
	  (ILE167)  (THR171) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      -64.4°   E2                                                             
E3      118.4°  170.0°   E3                                                      
E4      -79.0°  -22.8°  161.2°   E4                                               
E5      118.2°  111.2°  -58.8°  121.6°   E5                                        
E6      -50.8°  -97.0°   91.5°  -94.9°  140.8°   E6                                 
E7      137.3°   86.1°  -86.1°   84.9°  -43.2°  171.3°   E7                          
E8      -34.3°  -93.5°   92.6°  -99.9°  126.0°  -21.6°  166.8°   E8                   
H9      135.3°   71.9° -103.1°   63.3°  -69.1°  148.5°  -25.9°  163.0°   H9            
E10     -40.2° -102.7°   78.5° -119.2°   93.9°  -52.3°  134.9°  -32.5°  157.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3kffa_ :    (ARG39)  (THR152)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2r73a_ :    (ARG48)  (SER161)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Trichosurus vulpecula [TaxId: 9337]
 d2q2ma_ :    (ARG40)  (ASN152)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
 d1ew3a_ :    (ARG57)  (THR171)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Lipocalin allergen |Horse (Equus caballus), equ c 1 [TaxId: 9796]
 d2ra6b_ :    (ARG48)  (SER161)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Trichosurus vulpecula [TaxId: 9337]
 d1uz2x_ :    (ARG40)  (PHE151)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
 d2ra6a_ :    (ARG48)  (SER161)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Trichosurus vulpecula [TaxId: 9337]
 d2ra6c_ :    (ARG48)  (SER161)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Trichosurus vulpecula [TaxId: 9337]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60