Protein Concepts Dictionary

Tableau information

Concept source:  d3wtsa_  amino acid (a.a.) range (GLU61)(HIS163)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU61)   (ASP66) E1
	   (ASN69)   (HIS78) E2
	   (PHE89)   (GLY95) E3
	  (LEU102)  (GLY108) E4
	  (TYR113)  (ARG118) E5
	  (ALA120)  (ASN126) E6
	  (GLN127)  (ASP133) E7
	  (ASP133)  (GLY138) E8
	  (GLY143)  (PHE153) E9
	  (GLN158)  (HIS163) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      110.7°   E2                                                             
E3      -65.1°  160.9°   E3                                                      
E4       72.1°  -44.0°  121.0°   E4                                               
E5     -145.8°   88.1° -105.4°  132.0°   E5                                        
E6     -106.5°  137.8°  -41.4°  140.2°   71.2°   E6                                 
E7      105.4°  -24.1°  169.6°  -56.4°   79.9°  147.8°   E7                          
E8       46.2°  -65.1°  106.0°  -27.8°  146.0° -142.8°   67.0°   E8                   
E9      -84.1°  151.5°  -47.4°  155.9°  -68.2°  -50.1°  130.2°  128.3°   E9            
E10     101.3°  -29.5°  131.5°  -30.1°  108.0°  123.9°  -52.4°  -57.9°  173.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3wtwa_ :    (GLY60)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d1eaoa_ :    (GLU61)  (THR161)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d3wtta_ :    (GLY60)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d1e50c_ :    (GLU61)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
 d1e50e_ :    (GLU61)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
 d1hjbc_ :    (GLY60)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d1eaqa_ :    (GLU61)  (THR161)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d3wtsa_ :    (GLU61)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d1eana_ :    (GLY60)  (THR161)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d3wtsf_ :    (GLU61)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d3wtua_ :    (GLY60)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d3wtva_ :    (GLY60)  (HIS163)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d1eaqb_ :    (GLU61)  (THR161)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Mouse (Mus musculus) [TaxId: 10090]
 d2j6wa_ :    (GLU61)  (THR161)   [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.2