Protein Concepts Dictionary

Tableau information

Concept source:  d1xnda_  amino acid (a.a.) range (TYR14)(THR95)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR14)   (ASP20) E1
	   (GLY24)   (ASN29) E2
	   (SER34)   (SER40) E3
	   (ASN44)   (GLY50) E4
	   (VAL59)   (GLY64) E5
	   (GLY64)   (ASN69) E6
	   (ASN71)   (SER75) E7
	   (SER75)   (ARG81) E8
	   (LEU84)   (VAL90) E9
	   (GLU91)   (THR95) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2     -171.1°   E2                                                             
E3       10.9°  175.2°   E3                                                      
E4     -178.6°    8.8° -168.7°   E4                                               
E5      -61.6°  122.8°  -52.6°  117.3°   E5                                        
E6        6.1° -174.8°    9.5° -174.8°   62.1°   E6                                 
E7      158.4°  -16.8°  167.9°  -22.5°  139.5° -158.4°   E7                          
E8       91.3°  -80.6°  102.2°  -89.1°  138.0°   94.4°   68.8°   E8                   
E9      -98.3°   90.3°  -87.7°   81.5°  -55.3°  -94.4°  100.1°  166.7°   E9            
E10     -18.1°  167.0°   -8.4°  161.0°   44.3°  -17.8° -176.2° -108.5°  -82.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vula_ :    (PHE18)   (SER98)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1m4wa_ :    (PHE16)   (THR96)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Nonomuraea flexuosa [TaxId: 103836]
 d3vzja_ :     (ASP4)   (THR93)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
 d2vgda_ :    (TYR18)   (SER98)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |automated matches |Escherichia coli [TaxId: 562]
 d4hk9a_ :    (PHE14)   (THR95)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei [TaxId: 51453]
 d3ri8a_ :     (ASN5)   (ASP88)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus kawachii [TaxId: 40384]
 d1bk1a_ :     (ASN5)   (ASP88)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus kawachii [TaxId: 40384]
 d2b46x_ :     (ASP4)   (THR87)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
 d1xyna_ :     (ASN4)   (ASN84)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei, xynI [TaxId: 51453]
 d4hkla_ :    (PHE14)   (THR95)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei [TaxId: 51453]
 d2vuja_ :    (TYR18)   (SER98)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |automated matches |Escherichia coli [TaxId: 562]
 d3ri9a_ :     (ASN5)   (ASP88)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus kawachii [TaxId: 40384]
 d4hk8a_ :    (PHE14)   (THR95)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei [TaxId: 51453]
 d1h1aa_ :    (TYR15)   (THR96)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Chaetomium thermophilum [TaxId: 209285]
 d1xnda_ :    (TYR14)   (THR95)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma harzianum [TaxId: 5544]
 d1ukra_ :     (ASN5)   (ASP88)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus niger [TaxId: 5061]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29