Protein Concepts Dictionary

Tableau information

Concept source:  d1boqa_  amino acid (a.a.) range (ALA55)(ARG140)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA55)   (PHE59) E1
	   (ASP63)   (LEU69) E2
	   (PRO77)   (GLY82) E3
	   (SER84)   (GLY90) E4
	   (ALA98)  (GLY104) E5
	  (GLY108)  (GLY112) E6
	  (ILE119)  (ALA124) E7
	  (GLY126)  (GLY130) E8
	  (GLY130)  (ASN135) E9
	  (ALA136)  (ARG140) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2     -165.4°   E2                                                             
E3      -61.8°  104.0°   E3                                                      
E4       90.0° -104.2°  151.8°   E4                                               
E5     -117.1°   52.7°   77.2° -120.1°   E5                                        
E6       49.1° -142.8°  -99.2°   57.4°  163.4°   E6                                 
E7      -91.6°   79.8°   70.6° -113.5°  -27.5°  135.9°   E7                          
E8       98.4°  -89.4° -109.9°   71.6°  141.4°  -55.2°  168.9°   E8                   
E9      -79.0°   90.0°  -31.9°  149.1°  -90.4°   94.8°   95.8°  -81.4°   E9            
E10    -103.1°   70.4°   83.6° -104.8°   22.7° -141.6°  -14.2°  158.3° -105.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gbja_ :    (ALA88)  (ARG192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d1sgca_ :    (THR89)  (PRO192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease A |Streptomyces griseus, strain k1 [TaxId: 1911]
 d1p09a_ :    (ALA89)  (ARG192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d2pfea_ :    (ALA88)  (GLY192)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Thermobifida fusca YX [TaxId: 269800]
 d3urea_ :    (ALA88)  (ARG192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d2sfaa_ :    (ALA57)  (PRO144)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Serine proteinase |Streptomyces fradiae [TaxId: 1906]
 d2ouaa_ :    (GLU88)  (PRO192)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Nocardiopsis alba [TaxId: 53437]
 d1gbea_ :    (ALA88)  (ARG192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d1boqa_ :    (ALA55)  (ARG140)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47