Tableau information
Concept source: d1gvmd_ amino acid (a.a.) range (ARG219)(LYS318)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG219) (HIS223) E1
(ASN227) (ASP232) E2
(GLY240) (ALA245) E3
(LYS247) (ASN252) E4
(GLY260) (LYS265) E5
(THR267) (ASP272) E6
(ALA282) (SER286) E7
(THR290) (LYS296) E8
(PRO305) (PRO311) E9
(LEU314) (LYS318) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 157.1° E2
E3 -124.4° 70.9° E3
E4 43.3° -115.6° 156.8° E4
E5 114.6° -54.8° -120.9° 76.2° E5
E6 -80.0° 105.9° 48.3° -110.1° 159.0° E6
E7 15.8° -152.9° 136.0° -38.8° -101.4° 94.9° E7
E8 151.5° -5.6° -74.5° 110.6° 53.5° -106.3° 148.6° E8
E9 -106.8° 95.1° 36.6° -149.1° 123.3° -61.2° -110.3° 100.3° E9
E10 92.8° -67.5° -136.8° 49.5° 34.1° -136.6° 85.4° -63.2° 156.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gvma_ : (ASP218) (LYS318) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Choline binding domain of autolysin C-LytA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1gvmb_ : (ASP218) (LYS318) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Choline binding domain of autolysin C-LytA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1gvmf_ : (ASP218) (LYS318) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Choline binding domain of autolysin C-LytA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4iwta_ : (ARG219) (LYS318) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Choline binding domain of autolysin C-LytA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2bmlb_ : (ARG219) (LYS318) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2biba1 : (GLN357) (ASP449) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Teichoic acid phosphorylcholine esterase Pce (LytD), C-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1gvmd_ : (ARG219) (LYS318) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Choline binding domain of autolysin C-LytA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.109