Protein Concepts Dictionary

Tableau information

Concept source:  d1c3da_  amino acid (a.a.) range (GLY138)(LYS291)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY138)  (ASN143) H1
	  (GLU145)  (ALA161) H2
	  (GLU166)  (ASN170) H3
	  (LEU172)  (ASN186) H4
	  (ARG192)  (GLY207) H5
	  (PRO212)  (LEU218) H6
	  (GLN233)  (LYS251) H7
	  (ASP252)  (GLN266) H8
	  (SER275)  (LYS291) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2     -149.3°   H2                                                      
H3      -36.2° -113.2°   H3                                               
H4       59.6° -147.0°   93.2°   H4                                        
H5     -120.6°   34.3°  -87.7° -136.2°   H5                                 
H6      104.2° -101.5°  132.5°   71.0° -134.8°   H6                          
H7     -115.7°   49.4°  -91.4° -113.8°   22.6° -136.1°   H7                   
H8       88.9° -105.3°  106.3°   84.4° -137.0°   30.5° -154.2°   H8            
H9     -132.6°   49.1° -117.1° -102.0°   41.9° -110.0°   27.0° -135.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2goxa_ :  (HIS1126) (LYS1284)   [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
 d4m76a_ :  (ILE1130) (ASP1285)   [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
 d1c3da_ :   (GLY138)  (LYS291)   [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
 d3oxua_ :   (ILE137)  (ASP292)   [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3oxuc_ :   (HIS133)  (LYS291)   [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qqfa_ :  (GLY1131) (ASP1285)   [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1ghqa_ :   (GLY138)  (ASP296)   [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.102