Protein Concepts Dictionary

Tableau information

Concept source:  d1jpla_  amino acid (a.a.) range (ALA4)(GLY142)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA4)   (ALA16) H1
	   (ASP25)   (LYS38) H2
	   (GLU41)   (SER56) H3
	   (GLU59)   (CYS76) H4
	   (GLY77)   (LYS86) H5
	   (LEU90)   (SER98) H6
	  (LEU102)  (VAL106) H7
	  (SER107)  (PRO126) H8
	  (LYS130)  (GLY142) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2     -158.2°   H2                                                      
H3      -42.2°  143.3°   H3                                               
H4      115.9°  -49.6° -153.4°   H4                                        
H5      -88.5°   91.9°  -51.4° -130.3°   H5                                 
H6      -38.7°  143.6°    5.8° -147.6°  -52.2°   H6                          
H7       31.5° -148.0°   67.7°  -99.3° -118.3°  -66.1°   H7                   
H8      116.7°  -45.3° -147.3°   11.5° -119.1° -141.5° -105.8°   H8            
H9      -51.7°  125.9°  -20.6° -140.7°   36.8°  -18.1°  -81.9° -131.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3g2sa_ :     (THR9)  (GLY143)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1lf8c_ :     (SER8)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d1juqa_ :    (ASN18)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d1jplb_ :     (ALA4)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d1jwfa_ :    (ASP26)  (GLY143)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga1 |Human (Homo sapiens) [TaxId: 9606]
 d1jpla_ :     (ALA4)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d3g2sb_ :     (THR9)  (GLY143)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1jwga_ :     (THR9)  (GLY143)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga1 |Human (Homo sapiens) [TaxId: 9606]
 d1py1c_ :    (TRP27)  (GLN142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga1 |Human (Homo sapiens) [TaxId: 9606]
 d1juqb_ :     (ALA4)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d1lf8b_ :     (GLU3)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d1lf8a_ :    (ASN18)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d1juqc_ :     (SER8)  (GLY142)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
 d1ujka_ :    (ASP26)  (TYR136)   [view usage] : a.118.9.2 |alpha-alpha superhelix |ENTH/VHS domain |VHS domain |ADP-ribosylation factor binding protein Gga1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118