Protein Concepts Dictionary

Tableau information

Concept source:  d2ohaa_  amino acid (a.a.) range (SER3)(GLY150)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER3)   (ALA19) H1
	   (ALA22)   (PRO37) H2
	   (PRO37)   (PHE43) H3
	   (PHE43)   (LEU49) H4
	   (GLU52)   (SER58) H5
	   (SER58)   (LYS78) H6
	   (HIS82)   (LYS98) H7
	  (ILE101)  (SER117) H8
	  (ALA125)  (GLY150) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      102.0°   H2                                                      
H3      -68.5° -112.5°   H3                                               
H4       57.4°  -73.8° -125.3°   H4                                        
H5      -85.1°  151.1°   43.9°  131.0°   H5                                 
H6     -155.9°  102.1°  102.1° -130.7°  -73.9°   H6                          
H7       62.6°  -41.4°   85.7°  -63.6°  128.5° -140.7°   H7                   
H8       72.4°  125.5° -114.7°   57.4°  -83.4°  -93.3°  118.6°   H8            
H9      -94.3°  -70.1°   46.2° -127.2°   81.5°   94.0°  -63.8°  160.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1myia_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Pig (Sus scrofa) [TaxId: 9823]
 d1ch5a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d2ohaa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1a6ga_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d2spoa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ebta_ :     (SER3)  (MET142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Clam (Lucina pectinata) [TaxId: 244486]
 d1mcya_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1myja_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Pig (Sus scrofa) [TaxId: 9823]
 d1azia_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]
 d1cioa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d2evka_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1xcha_ :     (SER3)  (LEU149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]
 d3m38a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1mnja_ :     (ASP4)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Pig (Sus scrofa) [TaxId: 9823]
 d2c0ka_ :     (ASN2)  (ALA148)   [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Gasterophilus intestinalis [TaxId: 84525]
 d1cp0a_ :     (GLU4)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1lhsa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Loggerhead sea turtle (Caretta caretta) [TaxId: 8467]
 d3sdna_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1duka_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d3nmla_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1cp5a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d2oh9a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1a6ka_ :     (SER3)  (LEU149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d2oh8a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1fcsa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ofka_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1umoa_ :    (SER20)  (GLY170)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Cytoglobin |Human (Homo sapiens) [TaxId: 9606]
 d4it8a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ch3a_ :     (GLU4)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d3oj1a_ :     (GLY1)  (GLY135)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Dehaloperoxidase |Amphitrite ornata [TaxId: 129555]
 d2dc3a_ :    (SER20)  (GLY170)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Cytoglobin |Human (Homo sapiens) [TaxId: 9606]
 d1b0ba_ :     (SER3)  (MET142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Clam (Lucina pectinata) [TaxId: 244486]
 d1mlqa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1cpwa_ :     (GLU4)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1myha_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Pig (Sus scrofa) [TaxId: 9823]
 d1ch1a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d3ag0a_ :    (SER20)  (GLY170)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Cytoglobin |Human (Homo sapiens) [TaxId: 9606]
 d1rsea_ :     (SER3)  (LEU149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]
 d1emya_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Asian elephant (Elephas maximus) [TaxId: 9783]
 d1mnjb_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Pig (Sus scrofa) [TaxId: 9823]
 d3lr7a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]
 d1dtia_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ltwa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1co9a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d3mn0a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Sperm whale (Physeter catodon) [TaxId: 9755]
 d4ooda_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ymaa_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]
 d2e2ya_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1cika_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d4fwza_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d4of9a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ch7a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1co8a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ch9a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d2ohba_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ch2a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
 d1ecaa_ :    (ASP14)  (MET136)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Erythrocruorin |Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]
 d1hrma_ :     (SER3)  (LEU149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]
 d1nz2a_ :     (SER3)  (GLY150)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Horse (Equus caballus) [TaxId: 9796]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.1