Protein Concepts Dictionary

Tableau information

Concept source:  d4osmb_  amino acid (a.a.) range (LEU551)(ARG652)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU551)  (GLY560) H1
	  (PRO563)  (ALA570) H2
	  (GLY574)  (ARG584) H3
	  (LEU585)  (GLY594) H4
	  (PRO597)  (ALA604) H5
	  (GLY609)  (ARG618) H6
	  (LEU619)  (GLY628) H7
	  (PRO631)  (ALA638) H8
	  (GLY642)  (ARG652) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      126.2°   H2                                                      
H3       30.0°  131.7°   H3                                               
H4      -23.4°  105.7°  -50.8°   H4                                        
H5      151.1°   28.4°  157.8°  127.9°   H5                                 
H6       30.8°  102.6°   32.4°   33.7°  131.0°   H6                          
H7      -45.6°   88.1°  -73.1°  -22.5°  106.4°   50.6°   H7                   
H8     -170.9°   54.2°  158.2°  150.7°   26.7°  154.9°  128.2°   H8            
H9       48.5°   77.7°   63.6°   31.5°  104.4°   31.9°   30.3°  131.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4cj9a_ :   (GLY129)  (GLY246)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |BurrH |Burkholderia rhizoxinica [TaxId: 412963]
 d4oswa_ :   (GLY234)  (ARG346)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |automated matches |Xanthomonas campestris [TaxId: 329463]
 d4oswa_ :   (LEU347)  (ARG448)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |automated matches |Xanthomonas campestris [TaxId: 329463]
 d4oswa_ :   (GLY472)  (ARG584)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |automated matches |Xanthomonas campestris [TaxId: 329463]
 d4oswa_ :   (LEU585)  (LEU688)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |automated matches |Xanthomonas campestris [TaxId: 329463]
 d3v6pa_ :   (GLY303)  (ARG414)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |dHax3 |Xanthomonas [TaxId: 338]
 d3v6pa_ :   (LEU416)  (GLY526)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |dHax3 |Xanthomonas [TaxId: 338]
 d3v6pa_ :   (LEU551)  (LEU653)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |dHax3 |Xanthomonas [TaxId: 338]
 d4cjaa_ :   (SER141)  (CYS245)   [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |BurrH |Burkholderia rhizoxinica [TaxId: 412963]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.298