Protein Concepts Dictionary

Tableau information

Concept source:  d2j2fc_  amino acid (a.a.) range (SER184)(GLU347)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER184)  (HIS213) H1
	  (ILE216)  (TYR236) H2
	  (THR237)  (ILE246) H3
	  (ASP247)  (LYS262) H4
	  (MET265)  (MET270) H5
	  (ASN277)  (GLY290) H6
	  (LYS295)  (LYS309) H7
	  (SER317)  (ARG329) H8
	  (PRO331)  (GLU347) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2     -160.9°   H2                                                      
H3     -149.2°  -16.6°   H3                                               
H4      -53.4°  138.6° -129.0°   H4                                        
H5      -75.5°  122.0°  121.9°   29.7°   H5                                 
H6       54.8° -106.2°  -98.6°  -99.7°  127.9°   H6                          
H7      128.0°  -38.7°  -47.5° -176.1° -151.7°   79.8°   H7                   
H8       -9.0° -161.8° -146.6°   45.5°   69.6°  -59.0° -135.6°   H8            
H9      -42.7°  153.3°  146.0°   17.2°   33.0°  -95.4° -166.4°  -36.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j2fc_ :   (SER184)  (GLU347)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
 d1afra_ :   (SER184)  (LEU337)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |delta 9-stearoyl-acyl carrier protein desaturase |Castor bean (Ricinus communis) [TaxId: 3988]
 d2j2fb_ :   (SER202)  (GLU347)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
 d2j2fa_ :   (SER184)  (GLU347)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
 d1oq4a_ :   (SER184)  (LYS346)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |delta 9-stearoyl-acyl carrier protein desaturase |Castor bean (Ricinus communis) [TaxId: 3988]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25