Protein Concepts Dictionary

Tableau information

Concept source:  d3pjah_  amino acid (a.a.) range (VAL3)(GLY216)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL3)   (GLN43) H1
	   (ASP53)   (LYS78) H2
	   (GLU82)   (HIS88) H3
	   (HIS88)  (GLU109) H4
	  (THR115)  (LEU123) H5
	  (ASP136)  (GLY162) H6
	  (ARG166)  (LEU183) H7
	  (ASP189)  (LEU198) H8
	  (LEU198)  (GLY216) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      170.4°   H2                                                      
H3      -69.2°  120.1°   H3                                               
H4       23.8° -147.7°  -91.9°   H4                                        
H5      102.3°  -75.1°   95.9°  108.1°   H5                                 
H6      -20.4°  164.8°   52.3°  -43.9°   91.9°   H6                          
H7      151.1°  -32.1° -109.4°  136.9° -106.4° -156.2°   H7                   
H8       -9.8° -174.7°   62.6°  -29.3°  109.5°   20.5° -143.7°   H8            
H9        5.1° -167.1°   72.8°  -19.5°  105.8°   25.3° -147.2°  -10.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1keyb_ :     (SER2)  (GLY216)   [view usage] : a.118.16.1 |alpha-alpha superhelix |Translin |Translin |Translin |Mouse (Mus musculus) [TaxId: 10090]
 d1j1ja_ :     (SER2)  (GLY216)   [view usage] : a.118.16.1 |alpha-alpha superhelix |Translin |Translin |Translin |Human (Homo sapiens) [TaxId: 9606]
 d3pjae_ :     (SER4)  (GLY216)   [view usage] : a.118.16.1 |alpha-alpha superhelix |Translin |Translin |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3pjab_ :     (SER2)  (GLY216)   [view usage] : a.118.16.1 |alpha-alpha superhelix |Translin |Translin |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3pjah_ :     (VAL3)  (GLY216)   [view usage] : a.118.16.1 |alpha-alpha superhelix |Translin |Translin |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118