Protein Concepts Dictionary

Tableau information

Concept source:  d1cu0a_  amino acid (a.a.) range (PHE4)(ARG154)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PHE4)   (ASP10) H1
	   (SER38)   (ALA49) H2
	   (THR59)   (ASN81) H3
	   (LYS85)   (LEU91) H4
	   (ASP92)  (GLY107) H5
	  (THR115)  (LYS124) H6
	  (TRP126)  (SER136) H7
	  (SER136)  (GLN141) H8
	  (ASN144)  (ARG154) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2     -160.6°   H2                                                      
H3      112.2°   87.2°   H3                                               
H4      114.0°  -59.4° -103.5°   H4                                        
H5      -42.8°  132.8°  106.3° -148.1°   H5                                 
H6      143.4°  -36.4°  -81.7°   30.5° -167.5°   H6                          
H7      -34.6°  136.2°  116.0° -136.5°   11.8° -162.1°   H7                   
H8       58.8° -103.2° -159.6°  -68.4°   79.7°  -96.2°  -68.2°   H8            
H9      152.3°   43.5°  -51.2°   59.6° -151.9°   31.6°  163.8° -127.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2lc9a_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1qt7a_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d3htba_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1qt8a_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1cv1a_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1l41a_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d190la_ :     (ASN2)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d229la_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d165la_ :     (ILE3)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1l76a_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1d2wa_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d164la_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d3dkex_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1cu2a_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1cv4a_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d261la_ :     (PHE4)  (THR166)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d131la_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1cu0a_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d2ntha_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d252la_ :     (PHE4)  (ARG154)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
 d1qtza_ :     (PHE4)  (THR155)   [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.2