Protein Concepts Dictionary

Tableau information

Concept source:  d3n37a_  amino acid (a.a.) range (ASP17)(PHE162)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP17)   (PHE30) H1
	   (LEU32)   (PRO37) H2
	   (PRO37)   (LEU48) H3
	   (THR49)   (ASN71) H4
	   (ILE73)   (ALA82) H5
	   (PRO85)  (LEU112) H6
	  (THR115)  (GLU127) H7
	  (PRO130)  (GLY144) H8
	  (ASP146)  (PHE162) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2       49.1°   H2                                                      
H3      -73.8°   66.3°   H3                                               
H4     -137.8°  151.8°  137.9°   H4                                        
H5     -154.0°  129.2°  131.6°  -28.6°   H5                                 
H6       23.6°  -45.1°  -50.3° -155.5°  174.1°   H6                          
H7      150.4°  131.6°   80.8°  -59.3°   54.5°  129.4°   H7                   
H8     -139.6°  140.7°  143.9°  -11.5°   20.2° -161.8°  -63.1°   H8            
H9       37.5°  -12.8°   61.9° -159.9° -141.6°   32.6°  136.6° -150.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4djnb_ :    (TYR49)  (ASP178)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4n83a_ :    (ILE17)  (ASN175)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Streptococcus sanguinis [TaxId: 388919]
 d4n83b_ :    (ILE17)  (ASN175)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Streptococcus sanguinis [TaxId: 388919]
 d3n38a_ :    (ASP17)  (GLY176)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1r2fa_ :    (ASP17)  (PHE162)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Salmonella typhimurium [TaxId: 90371]
 d3dhza_ :    (LYS28)  (PHE172)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Corynebacterium ammoniagenes [TaxId: 1697]
 d4n83g_ :    (ILE17)  (ASN175)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Streptococcus sanguinis [TaxId: 388919]
 d1w68a_ :    (HIS89)  (ARG250)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Mouse (Mus musculus) [TaxId: 10090]
 d2r2fb_ :    (ASP17)  (GLY176)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Salmonella typhimurium [TaxId: 90371]
 d2r2fa_ :    (ASP17)  (GLY176)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Salmonella typhimurium [TaxId: 90371]
 d3n39a_ :    (LYS18)  (GLY176)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1r2fb_ :    (ASP17)  (GLY176)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Salmonella typhimurium [TaxId: 90371]
 d3n37a_ :    (ASP17)  (PHE162)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4dr0a_ :    (THR18)  (PHE166)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25