Protein Concepts Dictionary

Tableau information

Concept source:  d1a9we_  amino acid (a.a.) range (THR12)(ALA142)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR12)   (MET18) H1
	   (ASN19)   (PRO36) H2
	   (PRO36)   (PHE42) H3
	   (SER50)   (GLY56) H4
	   (PRO58)   (ASN77) H5
	   (LEU81)   (PHE85) H6
	   (PHE85)   (HIS97) H7
	  (ASN102)  (HIS117) H8
	  (THR123)  (ALA142) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      101.4°   H2                                                      
H3      -64.3° -114.4°   H3                                               
H4      -88.9°  147.3°   43.2°   H4                                        
H5     -149.2°  109.3°   99.6°  -63.8°   H5                                 
H6       43.3°  -71.8°   54.5°   97.1°  147.4°   H6                          
H7       72.3°  -30.8°   92.4°  135.2° -137.2°  -42.1°   H7                   
H8       69.0°  127.4° -107.2°  -85.4°  -93.4°  112.0°  122.0°   H8            
H9      -89.1°  -71.6°   46.4°   77.6°   98.0°  -50.4°  -62.2°  152.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1g0bb_ :     (SER4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Horse (Equus caballus) [TaxId: 9796]
 d1y4gb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3fs4b_ :    (SER12)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Struthio camelus [TaxId: 8801]
 d3hf4f_ :    (ASN12)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1y4qb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3mjpb_ :    (THR12)  (ARG143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Coturnix japonica [TaxId: 93934]
 d2b7hd_ :    (SER12)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Dusicyon thous [TaxId: 9620]
 d1jebb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Mouse (Mus musculus) [TaxId: 10090]
 d1hbab_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d2oifa_ :    (MET25)  (LYS159)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
 d2qu0b_ :     (ALA5)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d1fsxb_ :   (ALA205)  (ALA342)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Cow (Bos taurus) [TaxId: 9913]
 d1x46a_ :     (ALA9)  (SER144)   [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Tokunagayusurika akamusi [TaxId: 28383]
 d6hbwb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1o1ib_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d2ri4l_ :     (ALA5)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Goat (Capra hircus) [TaxId: 9925]
 d4f4ob_ :    (VAL20)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Pig (Sus scrofa) [TaxId: 9823]
 d3whmb_ :     (THR4)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1itha_ :    (GLN11)  (MET140)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin |Innkeeper worm (Urechis caupo) [TaxId: 6431]
 d4ni1b_ :    (THR12)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1y7cb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d2ri4b_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Goat (Capra hircus) [TaxId: 9925]
 d3qjcb_ :     (THR4)  (HIS146)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1shrb_ :     (THR4)  (HIS146)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens), delta-chain [TaxId: 9606]
 d3dhrb_ :     (SER4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Domestic pigeon (Columba livia) [TaxId: 8932]
 d1a3nb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3nl7b_ :    (THR12)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1rqab_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1y45b_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3w4ub_ :     (THR4)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1nqpb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3szkb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d2r80b_ :     (ALA5)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Domestic pigeon (Columba livia) [TaxId: 8932]
 d1y7zb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1y5jb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3gdjb_ :     (SER4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
 d1a00b_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3wtgb_ :    (SER12)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Dromaius novaehollandiae [TaxId: 8790]
 d1y85b_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d2ri4d_ :     (THR4)  (THR123)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Goat (Capra hircus) [TaxId: 9925]
 d1hbha_ :    (ALA21)  (GLU139)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, alpha-chain |Emerald rockcod (Pagothenia bernacchii) [TaxId: 40690]
 d3hyub_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Guinea pig (Cavia porcellus) [TaxId: 10141]
 d1y7db_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3bcqb_ :     (SER4)  (THR124)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Brycon cephalus [TaxId: 126311]
 d1a0ub_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d2ri4j_ :     (ALA5)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Goat (Capra hircus) [TaxId: 9925]
 d1hbsb_ :     (PRO5)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1gcvb_ :     (GLN5)  (LYS133)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Houndshark (Mustelus griseus) [TaxId: 89020]
 d4mqjb_ :     (THR4)  (SER143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4esab_ :     (THR4)  (GLY142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Eleginops maclovinus [TaxId: 56733]
 d2zltb_ :     (SER4)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Horse (Equus caballus) [TaxId: 9796]
 d1hdbb_ :     (THR4)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1t1nb_ :     (THR4)  (TYR145)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Antarctic fish (Trematomus newnesi) [TaxId: 35730]
 d4hrrh_ :    (ALA14)  (LEU151)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Ark clam (Scapharca inaequivalvis) [TaxId: 6561]
 d4mqjd_ :     (THR4)  (SER143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xq5b_ :     (THR4)  (GLY142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Yellow perch (Perca flavescens) [TaxId: 8167]
 d1y5fb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d3cy5b_ :     (THR4)  (HIS146)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Buffalo (Bubalus bubalis) [TaxId: 89462]
 d3oo5b_ :    (THR12)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1spgb_ :     (THR4)  (THR124)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Fish (Leiostomus xanthurus) [TaxId: 59837]
 d3eokb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Duck (Anas platyrhynchos) [TaxId: 8839]
 d2oife_ :    (MET25)  (LYS159)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
 d1y4rb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d1fhjb_ :     (THR4)  (HIS146)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Maned wolf (Chrysocyon brachyurus) [TaxId: 68728]
 d3a0gb_ :     (THR4)  (HIS143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Guinea pig (Cavia porcellus) [TaxId: 10141]
 d1a9we_ :    (THR12)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens), embryonic gower II [TaxId: 9606]
 d1jebd_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Mouse (Mus musculus) [TaxId: 10090]
 d2qmbb_ :     (ALA5)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Turkey (Meleagris gallopavo) [TaxId: 9103]
 d1y4bb_ :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]
 d2b7hb1 :     (THR4)  (ALA142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, alpha-chain |Dusicyon thous [TaxId: 9620]
 d1fawb_ :     (SER4)  (ARG143)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Graylag goose (Anser anser) [TaxId: 8843]
 d1ch4a_ :     (THR4)  (THR142)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Chimeric hemoglobin beta-alpha |Synthetic, based on Homo sapiens sequence
 d1cmyb_ :    (THR12)  (HIS146)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, beta-chain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.1