Protein Concepts Dictionary

Tableau information

Concept source:  d1fgra1  amino acid (a.a.) range (ALA254)(SER336)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA254)  (GLN264) H1
	  (VAL266)  (LYS277) H2
	  (PHE286)  (ASP291) H3
	  (ASP291)  (GLY296) H4
	  (GLY296)  (PRO300) E5
	  (PRO300)  (LEU310) H6
	  (LEU310)  (LEU316) H7
	  (HIS323)  (PRO328) E8
	  (PRO330)  (SER336) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      -31.7°   H2                                                      
H3      127.5°  135.3°   H3                                               
H4       95.4°   92.3°  -43.3°   H4                                        
E5       50.5°   78.0°  -81.1°  -71.0°   E5                                 
H6      158.1° -168.7°  -50.1°  -91.2°  113.2°   H6                          
H7      -87.0°  -56.8° -125.2° -101.7° -134.2° -112.0°   H7                   
E8     -136.8° -121.3°  -95.1° -124.7°  150.8°   48.7°   71.0°   E8            
H9       90.8°   59.1° -110.7°  -85.0°  129.8° -110.6°   16.8°  -78.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3pzwa2 :   (ALA254)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1y4ka1 :   (ALA254)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d3bnba1 :   (ALA254)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1fgra1 :   (ALA254)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1f8na1 :   (ALA254)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d1fgqa1 :   (ALA254)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d3bnea1 :   (ALA254)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
 d4whaa2 :   (LEU262)  (SER336)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.119