Tableau information
Concept source: d1lj9a_ amino acid (a.a.) range (LEU5)(LYS144)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HHHHEEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU5) (PHE23) H1
(TYR33) (PRO43) H2
(GLN47) (LEU53) H3
(ARG58) (GLY72) H4
(PHE73) (GLU78) E5
(ILE85) (ALA90) E6
(THR91) (VAL97) H7
(TYR98) (GLN114) H8
(SER117) (LYS144) H9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 88.8° H2
H3 123.2° 117.8° H3
H4 15.8° -84.3° 112.4° H4
E5 -106.3° 55.1° 130.4° -115.0° E5
E6 62.0° -102.6° -63.5° 49.1° 156.6° E6
H7 115.4° -100.6° 20.5° 101.4° -131.3° -53.6° H7
H8 138.0° -115.3° 15.3° 127.7° -115.7° -78.7° 30.8° H8
H9 -95.3° -94.0° 128.0° -110.6° -41.6° 151.1° 145.9° 115.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4llla_ : (THR4) (GLN139) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1lj9a_ : (LEU5) (LYS144) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Transcriptional regulator SlyA |Enterococcus faecalis [TaxId: 1351]
d3q5fa_ : (LEU5) (HIS141) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Transcriptional regulator SlyA |Salmonella typhimurium [TaxId: 90371]
d3q5fb_ : (LEU5) (HIS141) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Transcriptional regulator SlyA |Salmonella typhimurium [TaxId: 90371]
d3bpxb_ : (LEU7) (MET141) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Methanobacterium thermoautotrophicum
d3bpva_ : (PRO6) (MET141) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Methanobacterium thermoautotrophicum
d1lj9b_ : (ASP3) (LYS143) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Transcriptional regulator SlyA |Enterococcus faecalis [TaxId: 1351]
d3broc_ : (LEU5) (ASP138) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Transcriptional regulator OEOE1854 |Oenococcus oeni [TaxId: 1247]
d4llld_ : (THR4) (GLN139) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d3e6md_ : (PHE23) (THR156) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4