Protein Concepts Dictionary

Tableau information

Concept source:  d3juva_  amino acid (a.a.) range (HIS314)(ARG410)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (HIS314)  (ASP330) H1
	  (LYS331)  (GLY346) H2
	  (THR353)  (ASP359) H3
	  (ASN361)  (LEU373) H4
	  (MET378)  (MET383) E5
	  (THR386)  (VAL390) E6
	  (TYR393)  (PRO397) E7
	  (GLY398)  (SER404) E8
	  (SER404)  (ARG410) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2     -106.3°   H2                                                      
H3       56.9°  133.7°   H3                                               
H4      111.3° -141.5°  -66.3°   H4                                        
E5     -148.6°   88.2°  -92.9°  -55.1°   E5                                 
E6      -16.6°  103.1°  -47.6° -110.6° -133.9°   E6                          
E7      144.1°  -75.9°  144.8°   78.5°  -65.8°  160.2°   E7                   
E8      -32.6°   76.5°   87.5° -141.9°  158.8°   40.2° -122.6°   E8            
H9      -30.7°   95.1°   46.9° -113.2°  122.6°   14.5° -168.0°  -46.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ejgg_ :   (TYR287)  (PHE405)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3l4da_ :   (SER276)  (ASP389)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Leishmania infantum [TaxId: 5671]
 d2vkua_ :   (SER242)  (ILE355)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3dl9a_ :   (SER296)  (TRP414)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Vitamin D 25-hydroxylase Cyp2R1 |Human (Homo sapiens) [TaxId: 9606]
 d3k9va_ :   (SER312)  (SER425)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3juva_ :   (HIS314)  (ARG410)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ea1a_ :   (MET254)  (ILE355)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome p450 14 alpha-sterol demethylase (cyp51) |Mycobacterium tuberculosis [TaxId: 1773]
 d3jusa_ :   (MET304)  (ARG410)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3l4db_ :   (SER276)  (ASP389)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Leishmania infantum [TaxId: 5671]
 d1dz4a_ :   (THR234)  (ASP328)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
 d1ue8a_ :   (SER196)  (ASP288)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp119 |Sulfolobus tokodaii [TaxId: 111955]
 d3c6ga1 :   (SER296)  (TRP414)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Vitamin D 25-hydroxylase Cyp2R1 |Human (Homo sapiens) [TaxId: 9606]
 d1e9xa_ :   (MET254)  (ILE355)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome p450 14 alpha-sterol demethylase (cyp51) |Mycobacterium tuberculosis [TaxId: 1773]
 d3ld6b_ :   (THR297)  (LEU411)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ebsa_ :   (GLU304)  (ARG400)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104