Protein Concepts Dictionary

Tableau information

Concept source:  d1nt4a_  amino acid (a.a.) range (GLN236)(LEU366)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN236)  (LEU251) H1
	  (PRO255)  (VAL261) H2
	  (PRO264)  (ASP276) H3
	  (LYS282)  (VAL287) E4
	  (HIS289)  (ASP301) H5
	  (GLY317)  (LYS329) E6
	  (ARG332)  (GLN342) E7
	  (SER343)  (ASN349) H8
	  (GLN360)  (LEU366) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2       68.5°   H2                                                      
H3      -80.7°  -65.3°   H3                                               
E4      105.2°  111.8° -172.4°   E4                                        
H5      -68.1° -116.4°  -63.7°  122.8°   H5                                 
E6      -73.8°  -82.3°  -21.5°  164.7°   42.3°   E6                          
E7      129.9°   97.9°  139.0°  -33.4° -145.6°  154.7°   E7                   
H8      100.2°   45.6°  101.7°  -72.6°  162.0°  122.7°  -52.4°   H8            
E9      -35.7° -102.7°  -85.5°  102.1°   39.4°  -67.8°  135.6° -134.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ntlb_ :   (LEU241)  (LEU364)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |automated matches |Enterobacter cloacae [TaxId: 550]
 d3ntla_ :   (LEU241)  (LEU364)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |automated matches |Enterobacter cloacae [TaxId: 550]
 d1dkpa_ :   (SER248)  (LEU379)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Escherichia coli [TaxId: 562]
 d1nt4a_ :   (GLN236)  (LEU366)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Glucose-1-phosphatase |Escherichia coli [TaxId: 562]
 d3zhcb_ :   (LEU246)  (ALA380)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |automated matches |Citrobacter braakii [TaxId: 57706]
 d4arva_ :   (GLY241)  (GLU384)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Yersinia kristensenii [TaxId: 28152]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.60