Protein Concepts Dictionary

Tableau information

Concept source:  d3p3na_  amino acid (a.a.) range (GLN223)(ILE344)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHHEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN223)  (TYR228) H1
	  (HIS234)  (ASP237) H2
	  (PRO253)  (ASN257) H3
	  (ASN257)  (PRO267) E4
	  (GLY268)  (PRO274) E5
	  (TRP278)  (SER283) E6
	  (GLY288)  (LYS298) E7
	  (ALA312)  (LEU330) H8
	  (ASN332)  (ILE344) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      130.9°   H2                                                      
H3     -142.0°   43.4°   H3                                               
E4      -87.9°   48.4°  -63.1°   E4                                        
E5      -98.1° -111.3°  119.2° -151.5°   E5                                 
E6       60.9°   87.2°  -81.3°  -40.4° -158.7°   E6                          
E7     -126.4°  -67.8°   88.8°  111.6°  -43.6° -151.5°   E7                   
H8      -46.5° -113.9° -157.3° -102.8°  -64.2°  -99.2°  -80.0°   H8            
H9     -121.0°  108.0°   78.8°  140.8°   56.7° -129.1°   74.0°  116.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ycia_ :   (GLN223)  (GLY331)   [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
 d1iz3a_ :   (PHE224)  (ILE344)   [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
 d2wa3a_ :   (GLN223)  (ASN349)   [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
 d2y0ia_ :   (GLN223)  (ILE344)   [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
 d3p3na_ :   (GLN223)  (ILE344)   [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.82