Protein Concepts Dictionary

Tableau information

Concept source:  d1rlua1  amino acid (a.a.) range (PRO72)(THR199)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO72)   (LYS83) H1
	   (LYS83)   (LEU90) H2
	   (ASP94)  (ALA100) E3
	  (GLY107)  (GLY122) H4
	  (LEU124)  (PHE135) E5
	  (LYS138)  (CYS155) H6
	  (ASP156)  (PRO162) E7
	  (PRO162)  (GLN168) H8
	  (SER175)  (THR199) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      -64.2°   H2                                                      
E3      153.4°  130.5°   E3                                               
H4      -33.5°  -52.4° -171.5°   H4                                        
E5      159.9°  122.1°   -9.3° -166.3°   E5                                 
H6      -30.6°  -56.2°  171.0°   -4.5° -169.5°   H6                          
E7      150.4°  103.9°  -26.7°  155.2°  -19.3° -159.5°   E7                   
H8      109.2°   52.0°  -78.7°  104.3°  -70.9°  108.2°  -52.0°   H8            
H9      -35.8°  -49.3°  170.4°   -3.6°  163.5°   -8.0°  151.6°  101.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4drxa1 :   (TYR108)  (THR239)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d1tvkb1 :   (ASN100)  (THR237)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Cow (Bos taurus) [TaxId: 9913]
 d4f6ra1 :   (TYR108)  (THR239)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d3wgka1 :    (PRO75)  (ALA202)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Staphylococcus aureus [TaxId: 1280]
 d2rhha1 :    (PRO75)  (ALA202)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Bacillus subtilis [TaxId: 1423]
 d1ofua1 :    (PRO75)  (PRO204)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Pseudomonas aeruginosa [TaxId: 287]
 d3du7b1 :   (THR109)  (THR239)   [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
 d1tubb1 :   (ASN102)  (PRO245)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Pig (Sus scrofa) [TaxId: 9823]
 d2p4nb1 :   (ASN102)  (PHE244)   [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
 d2r6r11 :    (PRO71)  (THR199)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Aquifex aeolicus [TaxId: 224324]
 d4i4tb1 :   (ASN102)  (THR239)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1rlua1 :    (PRO72)  (THR199)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Mycobacterium tuberculosis [TaxId: 1773]
 d4i50b1 :   (ASN102)  (THR239)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3wgla1 :    (PRO75)  (ALA202)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Staphylococcus aureus [TaxId: 158878]
 d2hxfb1 :   (ASN102)  (PHE244)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Pig (Sus scrofa) [TaxId: 9823]
 d1jffb1 :   (ASN102)  (VAL238)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Cow (Bos taurus) [TaxId: 9913]
 d4lnub1 :   (ASN102)  (THR239)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d3rycb1 :   (ASN102)  (THR239)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.32,    i.10