Protein Concepts Dictionary

Tableau information

Concept source:  d2iofa_  amino acid (a.a.) range (ILE97)(LEU206)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE97)  (ALA102) H1
	  (VAL108)  (GLY119) H2
	  (LYS121)  (THR126) E3
	  (THR129)  (GLY144) H4
	  (PHE149)  (PRO153) E5
	  (PRO163)  (GLY174) H6
	  (MET181)  (ASP186) E7
	  (THR187)  (GLY198) H8
	  (TRP200)  (LEU206) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      -59.0°   H2                                                      
E3      146.5°  138.5°   E3                                               
H4      -47.1°  -87.4°  134.1°   H4                                        
E5      136.6°  119.3°  -21.5°  151.4°   E5                                 
H6      -56.2°  -44.9°  156.8°  -50.8°  157.2°   H6                          
E7      123.7° -177.2°  -39.9°   94.2°  -59.6°  135.1°   E7                   
H8      -62.3°   13.8°  127.6°  -97.9°  107.1°  -58.6° -166.2°   H8            
E9      106.0°  153.3°  -66.7°   67.8°  -87.0°  108.6°  -27.5°  165.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2hi0a_ :   (HIS103)  (TRP209)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Lactobacillus delbrueckii [TaxId: 1584]
 d2hsza1 :    (ASN89)  (TYR196)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |Phosphoglycolate phosphatase Gph |Haemophilus somnus [TaxId: 731]
 d2ioha_ :    (ILE97)  (LEU206)   [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |automated matches |Bacillus cereus [TaxId: 1396]
 d1rqla_ :    (ILE97)  (LEU206)   [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
 d2iofa_ :    (ILE97)  (LEU206)   [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |automated matches |Bacillus cereus [TaxId: 1396]
 d1qq5a_ :    (ASP78)  (ARG192)   [view usage] : c.108.1.1 |HAD-like |HAD-like |HAD-related |L-2-Haloacid dehalogenase, HAD |Xanthobacter autotrophicus [TaxId: 280]
 d3umgh_ :   (SER102)  (LEU213)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d2g80b_ :    (ASP90)  (ARG220)   [view usage] : c.108.1.22 |HAD-like |HAD-like |Enolase-phosphatase E1 |Protein UTR4 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1te2a_ :    (SER71)  (VAL191)   [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |Phosphatase YniC |Escherichia coli [TaxId: 562]
 d3umgd_ :   (ASP101)  (LEU213)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d2hi0b_ :   (HIS103)  (TRP209)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Lactobacillus delbrueckii [TaxId: 1584]
 d3kbba_ :    (LEU64)  (HIS186)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
 d1qh9a_ :    (ASP80)  (ARG196)   [view usage] : c.108.1.1 |HAD-like |HAD-like |HAD-related |L-2-Haloacid dehalogenase, HAD |Pseudomonas sp., strain YL [TaxId: 306]
 d1feza_ :    (THR79)  (LEU206)   [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
 d1swva_ :    (ILE97)  (LEU206)   [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
 d3irua_ :    (GLU86)  (CYS212)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
 d2g80a1 :    (PRO91)  (ARG220)   [view usage] : c.108.1.22 |HAD-like |HAD-like |Enolase-phosphatase E1 |Protein UTR4 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1aq6a_ :    (ASP78)  (ARG192)   [view usage] : c.108.1.1 |HAD-like |HAD-like |HAD-related |L-2-Haloacid dehalogenase, HAD |Xanthobacter autotrophicus [TaxId: 280]
 d3umga_ :   (SER102)  (LEU213)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108