Protein Concepts Dictionary

Tableau information

Concept source:  d2ux0b_  amino acid (a.a.) range (SER385)(GLY520)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER385)  (GLY413) H1
	  (PHE415)  (ILE421) H2
	  (LEU426)  (GLU430) E3
	  (MET441)  (ASN455) H4
	  (LYS457)  (ILE463) E5
	  (ASN465)  (ILE471) E6
	  (ASP474)  (TYR486) E7
	  (ARG494)  (ASP508) E8
	  (LYS510)  (GLY520) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2     -146.8°   H2                                                      
E3      -70.5°  112.2°   E3                                               
H4      -65.4°  147.4°   67.0°   H4                                        
E5      161.9°   20.9°  101.2° -127.4°   E5                                 
E6      117.0°   42.6°  146.3° -146.6°  -60.9°   E6                          
E7      -45.9° -149.8°  -38.0°   36.7°  134.5°  162.8°   E7                   
E8      119.3°   52.8°  164.5° -127.0°  -65.7°  -20.1°  157.3°   E8            
E9      -69.3° -104.9°   14.4°   80.0°   98.6°  133.2°  -47.3°  153.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ux0d_ :   (MET386)  (GLY520)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ux0a1 :   (THR387)  (GLY520)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Human (Homo sapiens) [TaxId: 9606]
 d2ux0b_ :   (SER385)  (GLY520)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ux0f_ :   (GLU388)  (GLY520)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ux0c_ :   (SER385)  (GLY520)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ux0e_ :   (GLU388)  (GLY520)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.17