Protein Concepts Dictionary

Tableau information

Concept source:  d4ahha_  amino acid (a.a.) range (SER4)(GLN117)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER4)   (GLN12) H1
	   (ASP22)   (GLY34) H2
	   (ASP41)   (ILE46) E3
	   (LYS50)   (ASN59) H4
	   (ASN68)   (SER74) E5
	   (SER74)   (LEU83) E6
	   (PRO91)   (GLY99) E7
	  (ARG101)  (ALA106) E8
	  (VAL113)  (GLN117) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
H2      151.6°   H2                                                      
E3      -98.6°   97.5°   E3                                               
H4      126.6°  -75.4°   93.3°   H4                                        
E5      -50.4°  136.7°   48.5°  124.2°   E5                                 
E6       72.3°  -83.9°  156.8° -109.3° -116.9°   E6                          
E7      -89.6°  117.6°  -40.8°   67.2°  -57.6°  154.7°   E7                   
E8      151.7°  -17.8° -108.3°  -61.6°  153.2°   79.5°  116.5°   E8            
E9       34.1° -143.2°  118.9°   96.0°  -77.8°  -65.0°   90.0°  129.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1h53a_ :     (SER4)  (GLY117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d1onca_ :     (TRP3)  (GLY100)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Amphibian cytotoxic ribonuclease |Frog (Rana pipiens), P-30 [TaxId: 8404]
 d1un5a_ :     (SER4)  (GLN118)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d1c9xa_ :     (THR3)  (ALA122)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
 d1yv7a_ :     (TRP3)  (GLY100)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Frog (Rana pipiens) [TaxId: 8404]
 d3di8a_ :     (THR3)  (ALA122)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
 d1k59a_ :     (ARG5)  (GLY117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d1b1ja_ :     (GLN1)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d4ahja_ :     (SER4)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kvza_ :     (TRP4)  (GLY102)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Amphibian cytotoxic ribonuclease |Bullfrog (Rana catesbeiana), RNase4 [TaxId: 8400]
 d1k5aa_ :     (SER4)  (ASN109)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d4aoha_ :     (SER4)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d1m58a_ :     (ASN3)  (ALA101)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Amphibian cytotoxic ribonuclease |Bullfrog (Rana catesbeiana), RNase2 [TaxId: 8400]
 d1bc4a_ :     (ASN2)  (GLY106)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Amphibian cytotoxic ribonuclease |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d4ahfa_ :     (ASN3)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d2vq8a_ :     (LYS6)  (ASP123)   [view usage] : d.5.1.0 |RNase A-like |RNase A-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d1b1ia_ :     (ASN3)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d1b1ea_ :     (ASN3)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d3rh1a_ :     (THR3)  (ALA122)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
 d4ahha_ :     (SER4)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
 d4ahka_ :     (SER4)  (GLN117)   [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.5