Tableau information
Concept source: d4n0ka_ amino acid (a.a.) range (SER2)(GLU103)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HHEEEHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER2) (THR12) H1
(THR12) (CYS17) H2
(CYS17) (GLU21) E3
(GLY23) (VAL28) E4
(VAL28) (GLY34) E5
(THR49) (LYS55) H6
(ASP60) (ASN70) H7
(ASN70) (ILE75) H8
(LYS87) (GLU103) H9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -55.0° H2
E3 -136.4° -85.7° E3
E4 49.3° 97.1° -172.3° E4
E5 -159.4° -104.4° -27.6° 145.2° E5
H6 -153.8° -105.4° -43.8° 128.5° -18.4° H6
H7 38.9° 93.8° -156.5° 30.8° -161.5° 155.1° H7
H8 -85.7° -50.8° 82.0° -94.2° 79.2° 68.2° 115.7° H8
H9 -91.9° -43.3° 44.8° -139.6° -69.6° -80.0° 124.8° -68.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2b4za_ : (ASP2) (GLU104) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1i54a_ : (ASP2) (SER100) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Bluefin tuna (Thunnus thynnus) [TaxId: 8237]
d2b11b1 : (SER302) (GLU403) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4n0ka_ : (SER2) (GLU103) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.3