Protein Concepts Dictionary

Tableau information

Concept source:  d2qeec_  amino acid (a.a.) range (ASP282)(GLY413)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP282)  (PRO292) H1
	  (ASN293)  (SER302) E2
	  (SER302)  (GLN306) H3
	  (GLN306)  (PHE316) H4
	  (ASN318)  (GLY323) E5
	  (ASN330)  (GLY346) H6
	  (GLN361)  (ALA387) H7
	  (GLU393)  (LEU403) H8
	  (ARG406)  (GLY413) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2     -167.3°   E2                                                      
H3      -49.1° -123.0°   H3                                               
H4      -11.4° -167.3°  -44.4°   H4                                        
E5      141.5°  -28.6° -120.5° -151.0°   E5                                 
H6      -35.7°  144.6°   32.3°  -24.9° -152.7°   H6                          
H7      -73.1°  103.5°  -29.8°  -64.5°  115.5°  -41.8°   H7                   
H8      104.4°  -86.7°  145.4°  104.8°  -94.1°  113.1°  135.6°   H8            
H9       57.1° -135.6°   92.2°   53.4° -147.0°   60.3°   95.0°  -53.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2qeel_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2pnkh_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeej_ :   (ASP282)  (VAL412)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2q6ea_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeea_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2pnkl_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2pnkf_ :   (ASP282)  (VAL412)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2q08a_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeec_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2pnka1 :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeee_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2pnke_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeef_ :   (ASP282)  (VAL412)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d3hk5a_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2pnkd_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d2qeek_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d3hk8a_ :   (ASP282)  (GLY413)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1