Tableau information
Concept source: d1r9ja2 amino acid (a.a.) range (GLN118)(THR245)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN118) (THR136) H1
(ASP146) (TYR152) E2
(GLY154) (GLU160) H3
(GLY161) (LEU173) H4
(LYS177) (ASP183) E5
(CYS201) (GLY209) H6
(HIS211) (ASN217) E7
(TYR222) (ALA234) H8
(PRO239) (THR245) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -175.2° E2
H3 -76.5° 102.6° H3
H4 23.0° -152.2° -79.0° H4
E5 162.4° -16.5° -118.6° -144.5° E5
H6 -32.3° 149.0° 49.3° -48.3° 165.2° H6
E7 131.4° -49.1° -151.7° 124.4° -33.1° 157.7° E7
H8 -44.6° 135.4° 33.5° 54.3° 151.8° -16.2° -173.7° H8
E9 144.4° -34.8° -135.6° -130.6° -18.3° -174.9° -17.2° 168.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4c7va1 : (ARG142) (LYS247) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Lactobacillus salivarius [TaxId: 362948]
d3hyla1 : (ASP142) (ARG246) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1r9ja2 : (GLN118) (THR245) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Leishmania mexicana mexicana [TaxId: 44270]
d3m49b1 : (ASP142) (ARG246) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d3m49a1 : (ASP142) (ARG246) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d2c31a3 : (MET432) (MET544) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Oxalyl-CoA decarboxylase |Oxalobacter formigenes [TaxId: 847]
d1itza1 : (GLY132) (THR258) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Maize (Zea mays) [TaxId: 4577]
d2r5na2 : (GLN118) (LYS244) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Escherichia coli [TaxId: 562]
d1ay0a1 : (GLN120) (THR247) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1gpua1 : (GLY121) (THR247) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.36