Protein Concepts Dictionary

Tableau information

Concept source:  d2dpia2  amino acid (a.a.) range (ASP167)(GLY287)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP167)  (GLY192) H1
	  (GLY192)  (ALA200) E2
	  (LYS203)  (LYS214) H3
	  (GLN217)  (PRO223) E4
	  (CYS226)  (SER232) H5
	  (GLY243)  (GLY254) H6
	  (SER257)  (THR263) H7
	  (LYS267)  (GLU272) H8
	  (GLY274)  (GLY287) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2      167.2°   E2                                                      
H3      -60.0°  128.7°   H3                                               
E4      161.2°    8.8°  137.4°   E4                                        
H5       54.3° -117.5°   67.0° -119.9°   H5                                 
H6     -139.0°   40.1°  -93.9°   48.2°  -87.5°   H6                          
H7      129.3°  -41.5° -170.1°  -32.9°  114.4°   76.5°   H7                   
H8       32.8° -134.7°   89.6° -128.5°   50.1°  131.6°  -98.6°   H8            
H9      -96.0°   96.6°  -47.5°  102.4° -113.1°  -85.1° -127.8°  128.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2alza2 :   (ASP167)  (GLY287)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase iota |Human (Homo sapiens) [TaxId: 9606]
 d3gv5d1 :   (ASP167)  (GLY287)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase iota |Human (Homo sapiens) [TaxId: 9606]
 d1t3na2 :   (ASP167)  (GLY287)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase iota |Human (Homo sapiens) [TaxId: 9606]
 d3gv5b1 :   (ASP167)  (GLY287)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase iota |Human (Homo sapiens) [TaxId: 9606]
 d1k1qb2 :   (ASN118)  (ASN232)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus [TaxId: 2287]
 d3bq1a2 :   (ASN121)  (ASN232)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus acidocaldarius [TaxId: 2285]
 d2dpia2 :   (ASP167)  (GLY287)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase iota |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8