Protein Concepts Dictionary

Tableau information

Concept source:  d1ek4a1  amino acid (a.a.) range (SER140)(GLY250)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER140)  (LYS151) H1
	  (ASN156)  (ALA162) E2
	  (ALA164)  (LEU179) H3
	  (ASP183)  (CYS194) E4
	  (CYS194)  (GLY205) H5
	  (THR209)  (THR214) H6
	  (THR214)  (ARG220) H7
	  (VAL230)  (VAL239) E8
	  (GLU244)  (GLY250) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2      155.4°   E2                                                      
H3      -49.0°  139.7°   H3                                               
E4      128.8°  -48.2°  168.6°   E4                                        
H5     -152.3°  -30.6°  110.4°  -75.3°   H5                                 
H6       53.5°  103.7°   96.8°  -87.2°  125.5°   H6                          
H7     -107.0°   85.4°  -58.2°  123.3°   54.9°  142.0°   H7                   
E8      -36.0°  147.5°  -13.6° -163.7°  121.0°   83.5°  -71.0°   E8            
H9       40.1° -117.3°   85.3°  -97.1° -137.3°  -13.5° -137.1°   71.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fj4a1 :   (GLY141)  (GLY250)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
 d1h4fa1 :   (SER140)  (GLY250)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
 d3oyta1 :   (GLY142)  (GLY251)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Yersinia pestis [TaxId: 632]
 d3e60a1 :   (ASN147)  (GLY258)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
 d1ek4a1 :   (SER140)  (GLY250)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
 d4ddoa1 :   (ASN149)  (GLY260)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
 d1dd8a1 :   (SER140)  (GLY250)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95