Protein Concepts Dictionary

Tableau information

Concept source:  d3fe2a_  amino acid (a.a.) range (GLY208)(GLY303)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY208)  (GLY217) H1
	  (GLU219)  (ALA223) E2
	  (PRO225)  (GLY235) H3
	  (THR243)  (GLU249) E4
	  (GLU249)  (GLY257) H5
	  (PHE258)  (ILE269) H6
	  (GLN274)  (SER279) E7
	  (LYS284)  (LEU294) H8
	  (TYR297)  (GLY303) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2     -151.4°   E2                                                      
H3      -59.9°  122.3°   H3                                               
E4      149.8°  -30.7° -149.3°   E4                                        
H5     -129.5°   43.2°  -79.1°   71.8°   H5                                 
H6      -22.0°  158.8°   41.4° -169.1° -119.0°   H6                          
E7      149.2°  -34.4° -150.8°   -4.0°  -74.7°  166.2°   E7                   
H8      -30.8°  148.6°   30.0°  179.2°  107.4°  -11.6°  176.5°   H8            
E9      129.6°  -62.0°  155.8°  -31.6° -100.0°  139.0°  -27.7°  149.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j0ua1 :   (VAL146)  (VAL241)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fe2a_ :   (GLY208)  (GLY303)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4a4da_ :   (GLY208)  (ILE302)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2z0ma1 :    (TYR96)  (ILE192)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d4brwa1 :   (LEU154)  (LEU249)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d1q0ub_ :   (THR114)  (VAL211)   [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Probable DEAD box RNA helicase YqfR |Bacillus stearothermophilus [TaxId: 1422]
 d1hv8a1 :   (ILE114)  (ILE210)   [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Putative DEAD box RNA helicase |Methanococcus jannaschii [TaxId: 2190]
 d1q0ua_ :   (THR114)  (LEU212)   [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Probable DEAD box RNA helicase YqfR |Bacillus stearothermophilus [TaxId: 1422]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37