Protein Concepts Dictionary

Tableau information

Concept source:  d3li2b_  amino acid (a.a.) range (LEU109)(GLY223)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU109)  (LEU115) H1
	  (ASP118)  (ASP123) E2
	  (ASN131)  (ILE137) H3
	  (PRO139)  (LYS144) E4
	  (LYS151)  (ASN165) H5
	  (GLU167)  (ILE188) H6
	  (LYS195)  (ALA199) E7
	  (LEU206)  (ASN211) E8
	  (SER213)  (GLY223) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2      146.2°   E2                                                      
H3      -15.5° -159.9°   H3                                               
E4      129.5°  -18.3°  141.8°   E4                                        
H5      -34.0°  171.8°  -23.2°  163.4°   H5                                 
H6      124.5°  -32.0°  131.9°  -19.3°  154.5°   H6                          
E7       90.4° -121.4°   74.9° -131.5°   62.6°  119.0°   E7                   
E8      -50.9°  105.9°  -64.4°   99.0°   68.3° -110.5°  129.4°   E8            
H9       68.6°   77.7°  -83.2°   62.0° -101.4°  -65.5°  152.7°  -48.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3eiwa_ :   (LEU109)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3tlkb_ :   (ALA108)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d3lhsa_ :   (LEU109)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 426430]
 d3zkwb_ :   (PHE102)  (GLY214)   [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |Enterochelin uptake protein CeuE |Campylobacter jejuni [TaxId: 197]
 d1n4aa_ :    (ASN48)  (GLY162)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Vitamin B12 binding protein BtuF |Escherichia coli [TaxId: 562]
 d3eixa_ :   (LEU109)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3r5sa_ :   (GLU108)  (GLY222)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d3tefa_ :   (PHE121)  (GLY235)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d3tlka_ :   (ALA108)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d2r7ab_ :    (SER72)  (GLY191)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Shigella dysenteriae [TaxId: 622]
 d1k2vn_ :    (ASN88)  (TYR204)   [view usage] : c.92.2.1 |Chelatase-like |"Helical backbone" metal receptor |Periplasmic ferric siderophore binding protein FhuD |Periplasmic ferric siderophore binding protein FhuD |Escherichia coli [TaxId: 562]
 d3tnya_ :    (VAL74)  (GLY185)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
 d1efdn_ :    (ASN88)  (TYR204)   [view usage] : c.92.2.1 |Chelatase-like |"Helical backbone" metal receptor |Periplasmic ferric siderophore binding protein FhuD |Periplasmic ferric siderophore binding protein FhuD |Escherichia coli [TaxId: 562]
 d3gfvb_ :    (PHE88)  (GLY201)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
 d3li2a_ :   (LEU109)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 426430]
 d2r7aa_ :    (SER72)  (GLY191)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Shigella dysenteriae [TaxId: 622]
 d1esza_ :    (LEU89)  (TYR204)   [view usage] : c.92.2.1 |Chelatase-like |"Helical backbone" metal receptor |Periplasmic ferric siderophore binding protein FhuD |Periplasmic ferric siderophore binding protein FhuD |Escherichia coli [TaxId: 562]
 d4m7oa_ :    (LYS89)  (ASP207)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus epidermidis [TaxId: 176280]
 d3zk3a_ :   (PHE102)  (GLY214)   [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |Enterochelin uptake protein CeuE |Campylobacter jejuni [TaxId: 197]
 d3r5ta_ :   (LEU107)  (GLY222)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d3li2b_ :   (LEU109)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 426430]
 d3tlkc_ :   (SER107)  (GLY223)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Escherichia coli [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.92