Protein Concepts Dictionary

Tableau information

Concept source:  d1j2ya_  amino acid (a.a.) range (THR26)(ASN157)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR26)   (ASN42) H1
	   (GLU46)   (THR52) E2
	   (PHE54)   (SER68) H3
	   (GLU71)   (ASN76) E4
	   (ILE85)   (ALA94) H5
	   (PRO97)  (LEU103) E6
	  (GLU110)  (CYS122) H7
	  (GLY123)  (GLY128) E8
	  (LEU132)  (ASN157) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2      165.9°   E2                                                      
H3      -17.3°  156.4°   H3                                               
E4      143.0°  -40.0° -160.2°   E4                                        
H5      -16.8°  159.3°    4.0° -159.4°   H5                                 
E6      130.4°  -57.8°  145.7°  -22.3°  142.8°   E6                          
H7      -37.5°  138.4°  -20.2°  177.1°  -21.6° -160.5°   H7                   
E8      118.1°  -71.3°  132.3°  -36.1°  129.1°  -14.1°  146.6°   E8            
H9      -45.0°  124.6°  -32.2°  153.5°  -35.7°  170.1°  -23.6°  163.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1j2ya_ :    (THR26)  (ASN157)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Helicobacter pylori [TaxId: 210]
 d3n86v_ :    (THR28)  (HIS143)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4kija_ :    (HIS29)  (HIS143)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2wksa_ :    (THR26)  (GLU153)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Helicobacter pylori [TaxId: 210]
 d1uqra_ :    (LEU28)  (LYS145)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Actinobacillus pleuropneumoniae [TaxId: 715]
 d3n59g_ :    (HIS29)  (VAL144)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4b6sc_ :    (THR26)  (GLN155)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Helicobacter pylori [TaxId: 85962]
 d4rc9a_ :    (THR28)  (ILE145)   [view usage] : c.23.13.0 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |automated matches |automated matches |Acinetobacter baumannii [TaxId: 400667]
 d1uqrd_ :    (THR27)  (GLU150)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Actinobacillus pleuropneumoniae [TaxId: 715]
 d4b6ra_ :    (THR26)  (ASN157)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Helicobacter pylori [TaxId: 85962]
 d2xdaa_ :    (THR26)  (ALA150)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Helicobacter pylori [TaxId: 210]
 d3n59c_ :    (THR28)  (HIS143)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1gqoa_ :    (THR26)  (SER140)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Bacillus subtilis [TaxId: 1423]
 d2xd9b_ :    (THR26)  (GLN152)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Helicobacter pylori [TaxId: 210]
 d3n86j_ :    (THR28)  (GLU142)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23