Tableau information
Concept source: d1jpma1 amino acid (a.a.) range (PRO198)(LYS314)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO198) (GLY212) H1
(GLU216) (GLN220) E2
(ASP226) (ALA236) H3
(PRO240) (ASP244) E4
(THR249) (ARG260) H5
(ASP263) (LEU269) E6
(ILE275) (GLY289) H7
(GLY289) (MET297) E8
(LEU302) (LYS314) H9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 170.0° E2
H3 -22.0° 162.4° H3
E4 135.9° -38.8° 157.8° E4
H5 -66.9° 117.9° -45.1° 156.7° H5
E6 108.6° -66.4° 130.4° -27.6° -175.4° E6
H7 -65.3° 121.5° -43.5° 158.0° -13.0° -166.3° H7
E8 100.1° -70.5° 118.5° -45.3° 140.6° -37.8° 152.2° E8
H9 -72.6° 117.2° -56.2° 136.4° -43.6° 137.0° -30.8° -169.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1iwaa1 : (TRP214) (LEU350) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Galdieria partita [TaxId: 83374]
d1hvqa_ : (THR15) (THR172) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Hevamine A (chitinase/lysozyme) |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d1f9ca1 : (ARG210) (LEU319) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Muconate-lactonizing enzyme |Pseudomonas putida [TaxId: 303]
d1eoma_ : (THR159) (LYS289) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Endo-beta-N-acetylglucosaminidase |Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]
d1tv2a_ : (LEU240) (THR393) [view usage] : c.1.25.1 |TIM beta/alpha-barrel |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Monomethylamine methyltransferase MtmB |Methanosarcina barkeri [TaxId: 2208]
d1kqya_ : (THR15) (GLY167) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Hevamine A (chitinase/lysozyme) |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d4m0xb2 : (LEU210) (MET317) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1h1na_ : (ASP138) (LEU305) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endocellulase EngI |Thermoascus aurantiacus [TaxId: 5087]
d1bd0a2 : (LEU67) (PRO193) [view usage] : c.1.6.1 |TIM beta/alpha-barrel |PLP-binding barrel |Alanine racemase-like, N-terminal domain |Alanine racemase |Bacillus stearothermophilus [TaxId: 1422]
d3pzta_ : (LYS142) (SER283) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d4hyra2 : (HIS237) (VAL354) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Acidaminococcus sp. [TaxId: 563191]
d1bkha1 : (ARG210) (LEU319) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Muconate-lactonizing enzyme |Pseudomonas putida [TaxId: 303]
d1rqea2 : (ASP105) (GLY234) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |Transcarboxylase 5S subunit, N-terminal domain |Propionibacterium freudenreichii shermanii [TaxId: 1752]
d3my9a2 : (ASP214) (THR317) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Azorhizobium caulinodans [TaxId: 438753]
d2c6qa_ : (GLY106) (GLY235) [view usage] : c.1.5.0 |TIM beta/alpha-barrel |Inosine monophosphate dehydrogenase (IMPDH) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ps2a2 : (SER202) (ILE315) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Aspergillus oryzae [TaxId: 510516]
d1kr0a_ : (THR15) (GLY167) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Hevamine A (chitinase/lysozyme) |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d2ycix_ : (ARG26) (GLY152) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Carboxydothermus hydrogenoformans [TaxId: 246194]
d4m0xa2 : (TRP209) (MET317) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1xwya1 : (GLN70) (LEU189) [view usage] : c.1.9.12 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |TatD Mg-dependent DNase-like |Deoxyribonuclease TatD (MttC) |Escherichia coli [TaxId: 562]
d2ox4a2 : (LEU220) (ILE333) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
d3krzb_ : (SER188) (TYR321) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Thermoanaerobacter pseudethanolicus [TaxId: 340099]
d3be7a2 : (HIS81) (GLY237) [view usage] : c.1.9.18 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Zn-dependent arginine carboxypeptidase-like |Zn-dependent arginine carboxypeptidase |Unidentified organism [TaxId: 32644]
d2psnd2 : (PRO272) (CYS388) [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3fyya2 : (ARG209) (LEU314) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Oceanobacillus iheyensis [TaxId: 221109]
d1h1nb_ : (ASP138) (LEU305) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endocellulase EngI |Thermoascus aurantiacus [TaxId: 5087]
d3gr7a_ : (SER189) (ASN313) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d1rpxa_ : (PRO57) (GLY177) [view usage] : c.1.2.2 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |D-ribulose-5-phosphate 3-epimerase |D-ribulose-5-phosphate 3-epimerase |Potato (Solanum tuberosum) [TaxId: 4113]
d1xsia4 : (HIS439) (ARG560) [view usage] : c.1.8.13 |TIM beta/alpha-barrel |(Trans)glycosidases |YicI catalytic domain-like |Putative glucosidase YicI, domain 2 |Escherichia coli [TaxId: 562]
d4lefb_ : (SER97) (GLY233) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d4kema2 : (LEU229) (HIS335) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Azospirillum sp. [TaxId: 137722]
d1of6a_ : (SER184) (ASN368) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1