Protein Concepts Dictionary

Tableau information

Concept source:  d1p91a_  amino acid (a.a.) range (GLN68)(THR178)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN68)   (GLU80) H1
	   (THR87)   (GLY93) E2
	   (GLY97)  (LEU107) H3
	  (THR111)  (VAL117) E4
	  (SER118)  (ARG128) H5
	  (THR133)  (ALA137) E6
	  (ASP150)  (TYR156) E7
	  (ALA161)  (ARG166) H8
	  (GLY172)  (THR178) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2      153.5°   E2                                                      
H3      -33.7°  168.8°   H3                                               
E4      135.6°  -20.5°  169.2°   E4                                        
H5      -69.3°  137.0°  -36.6°  153.3°   H5                                 
E6      112.0°  -41.9°  145.1°  -24.6° -177.0°   E6                          
E7      162.3°  -14.7°  154.4°  -35.2°  124.2°  -55.2°   E7                   
H8      -39.0°  163.0°  -23.5°  153.6°  -37.1°  142.6°  158.3°   H8            
E9      166.1°  -22.9°  146.6°  -43.4°  115.6°  -63.8°   -8.6°  150.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2nnwb_ :    (SER56)  (ALA177)   [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus furiosus [TaxId: 2261]
 d1m6ex_ :    (LYS33)  (LEU210)   [view usage] : c.66.1.35 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Salicylic acid carboxyl methyltransferase (SAMT) |Salicylic acid carboxyl methyltransferase (SAMT) |Clarkia breweri [TaxId: 36903]
 d4qppb_ :    (VAL65)  (PRO186)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ftca_ :    (SER15)  (PHE126)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d1orha_ :    (THR55)  (PHE174)   [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Protein arginine N-methyltransferase 1, PRMT1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1jg1a_ :    (HIS78)  (PRO188)   [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Pyrococcus furiosus [TaxId: 2261]
 d3fuxc_ :    (SER32)  (LEU142)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d4dq0a_ :    (HIS19)  (THR138)   [view usage] : c.66.1.44 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TehB-like |automated matches |Escherichia coli [TaxId: 386585]
 d1oria_ :    (THR55)  (PHE174)   [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Protein arginine N-methyltransferase 1, PRMT1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4qppa_ :    (ASP63)  (PRO186)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qana_ :    (SER15)  (LEU125)   [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |rRNA adenine dimethylase |Bacillus subtilis, Ermc' [TaxId: 1423]
 d2fyta1 :   (PRO268)  (TYR376)   [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Protein arginine N-methyltransferase 3, PRMT3 |Human (Homo sapiens) [TaxId: 9606]
 d2yxea_ :    (ALA62)  (MET175)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
 d1vbfb_ :    (ALA55)  (LEU163)   [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Sulfolobus tokodaii [TaxId: 111955]
 d2h1rb_ :     (PRO7)  (MET118)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3r9xb_ :    (GLU16)  (PHE126)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
 d1dl5a1 :    (PRO61)  (LEU177)   [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Thermotoga maritima [TaxId: 2336]
 d2yvla_ :    (TYR76)  (LEU190)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d1vbfa_ :    (ALA55)  (LEU163)   [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Sulfolobus tokodaii [TaxId: 111955]
 d4o29a_ :    (ALA57)  (GLU174)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Pyrobaculum aerophilum [TaxId: 178306]
 d1wy7d_ :    (ASN33)  (SER146)   [view usage] : c.66.1.32 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Ta1320-like |Hypothetical protein PH1948 |Pyrococcus horikoshii [TaxId: 53953]
 d3fuxa_ :    (SER32)  (LEU142)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1qama_ :    (SER15)  (LEU125)   [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |rRNA adenine dimethylase |Bacillus subtilis, Ermc' [TaxId: 1423]
 d2o57c_ :    (ILE59)  (ASP187)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |Putative sarcosine dimethylglycine methyltransferase |Red algae (Galdieria sulphuraria) [TaxId: 130081]
 d3uzua_ :    (HIS24)  (MET143)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d2p7hb_ :    (PHE36)  (CYS140)   [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical protein ECA1738 |Erwinia carotovora [TaxId: 554]
 d2glua1 :     (GLY2)  (ASP115)   [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical protein YcgJ |Bacillus subtilis [TaxId: 1423]
 d1p91a_ :    (GLN68)  (THR178)   [view usage] : c.66.1.33 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA methyltransferase RlmA |rRNA methyltransferase RlmA |Escherichia coli [TaxId: 562]
 d2p7ia_ :    (PHE36)  (CYS140)   [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical protein ECA1738 |Erwinia carotovora [TaxId: 554]
 d1kp9a_ :    (LEU45)  (THR168)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |CmaA1 |Mycobacterium tuberculosis [TaxId: 1773]
 d4dq0b_ :    (HIS19)  (THR138)   [view usage] : c.66.1.44 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TehB-like |automated matches |Escherichia coli [TaxId: 562]
 d3ftfa_ :    (SER15)  (MET127)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d2o57b_ :    (ILE59)  (ASP187)   [view usage] : c.66.1.18 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Mycolic acid cyclopropane synthase |Putative sarcosine dimethylglycine methyltransferase |Red algae (Galdieria sulphuraria) [TaxId: 130081]
 d3o4fc_ :    (HIS69)  (GLN191)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1xxla_ :    (HIS-1)  (ASP115)   [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical protein YcgJ |Bacillus subtilis [TaxId: 1423]
 d1npyb1 :   (ASP103)  (VAL213)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase-like protein HI0607 |Haemophilus influenzae [TaxId: 727]
 d1f3la_ :   (PRO248)  (TYR356)   [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3q7ea_ :    (THR55)  (PRO175)   [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1or8a_ :    (THR55)  (PRO175)   [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Protein arginine N-methyltransferase 1, PRMT1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3futa_ :    (SER32)  (LEU142)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2,    c.66