Tableau information
Concept source: d4m4yb_ amino acid (a.a.) range (ALA5)(GLY155)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HEEHHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA5) (GLU11) H1
(TYR22) (ASN28) E2
(GLY33) (LYS39) E3
(LYS39) (ILE56) H4
(LYS75) (LEU102) H5
(GLU103) (LEU126) H6
(ASN129) (GLY134) E7
(GLY136) (HIS142) E8
(ASN146) (GLY155) H9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 18.3° E2
E3 153.1° 143.1° E3
H4 -146.7° -162.0° -54.9° H4
H5 31.6° -19.9° 124.2° 172.8° H5
H6 47.9° -34.0° 109.2° 164.0° 16.4° H6
E7 105.0° 121.7° -93.7° -41.7° 135.5° -151.3° E7
E8 48.9° -32.5° 111.1° 164.4° 19.6° 9.0° 153.9° E8
H9 151.8° 158.4° -26.0° 36.5° 139.4° 128.3° -69.4° 132.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3gbmb_ : (ALA5) (ASN154) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d3ubef_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza A virus [TaxId: 641501]
d3lzgj_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza A virus [TaxId: 641501]
d4kdmb_ : (ALA339) (GLY489) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d4uo4b_ : (ALA5) (GLY155) [view usage] : h.3.1.0 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d4jtxd_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d4uoab_ : (ALA5) (GLY155) [view usage] : h.3.1.0 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |automated matches |automated matches |Influenza a virus (a/canine/colorado/17864/2006(h3n8)) [TaxId: 867285]
d4bgwb_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza virus [TaxId: 644788]
d3s11f_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza A virus [TaxId: 11320]
d1jsdb_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d4unwb_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/eq/newmarket/93/(h3n8)) [TaxId: 159470]
d2fk0b1 : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d4m4yb_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza A virus [TaxId: 641501]
d4uo0b_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/equine/richmond/1/2007)(h3n8)) [TaxId: 560387]
d1mqlb_ : (GLY4) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d3eyjb_ : (GLY4) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza A virus [TaxId: 11320]
d3znkb_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus [TaxId: 644788]
d2wrhi_ : (ALA505) (GLY655) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/mallard/alberta/35/1976(h1n1)) [TaxId: 352520]
d4cyvb_ : (ALA5) (ASN154) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/mallard/sweden/51/2002 (h10n2)) [TaxId: 757360]
d3sdyb_ : (GLY4) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d4jtxj_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d4uo1d_ : (ALA5) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/equine/richmond/1/2007)(h3n8)) [TaxId: 560387]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
h.3