Protein Concepts Dictionary

Tableau information

Concept source:  d3n1qe_  amino acid (a.a.) range (SER71)(LYS187)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER71)   (LEU77) H1
	   (LEU77)   (PRO83) E2
	   (ASP84)   (GLU90) E3
	  (THR100)  (TRP118) H4
	  (ARG122)  (GLU127) E5
	  (ARG145)  (THR151) E6
	  (ASP155)  (ALA169) H7
	  (ASP172)  (TYR176) E8
	  (HIS181)  (LYS187) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2      -27.6°   E2                                                      
E3     -146.7° -120.2°   E3                                               
H4      -37.8°  -17.4°  115.9°   H4                                        
E5     -173.9° -150.3°  -30.1°  143.1°   E5                                 
E6      -44.7°  -17.9°  105.2°  -13.4°  134.4°   E6                          
H7       96.3°  123.9° -114.6°  129.1°  -85.2°  140.2°   H7                   
E8      -88.3°  -61.2°   63.8°  -52.4°   91.3°  -43.6° -168.7°   E8            
E9      104.5°  131.9° -105.3°  138.6°  -76.5°  149.0°    9.8°  166.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3m1nb_ :    (SER70)  (LYS186)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wfra_ :    (SER71)  (LYS187)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wfqa_ :    (SER71)  (LYS187)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3n1fb_ :    (SER75)  (LYS191)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4c4nb_ :    (SER71)  (LYS187)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3n1qe_ :    (SER71)  (LYS187)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ho5h_ :    (SER70)  (LYS186)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3k7hb_ :    (SER75)  (LYS191)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3m1na_ :    (SER70)  (LYS186)   [view usage] : d.65.1.2 |Hedgehog/DD-peptidase |Hedgehog/DD-peptidase |Hedgehog (development protein), N-terminal signaling domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.65