Tableau information
Concept source: d1al21_ amino acid (a.a.) range (SER76)(PRO181)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HEEHEEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER76) (ALA82) H1
(ARG83) (ASN94) E2
(LYS103) (LYS109) E3
(LEU118) (PHE124) H4
(THR126) (PHE130) E5
(ASP131) (PHE142) E6
(ASN147) (LEU151) E7
(ASN152) (PRO162) E8
(TYR173) (PRO181) H9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -32.3° E2
E3 159.0° 150.6° E3
H4 -168.2° -142.1° -15.2° H4
E5 -78.9° -72.7° -121.7° 110.7° E5
E6 -8.2° -40.5° 155.0° -168.9° -80.3° E6
E7 -139.4° 112.5° -60.4° 46.1° -67.1° -144.5° E7
E8 135.9° 113.4° -37.2° -32.7° -125.8° 140.8° 61.0° E8
H9 -160.7° -155.5° 33.8° 30.8° -89.6° -154.2° -43.5° 63.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ar71_ : (SER76) (THR177) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d1al21_ : (SER76) (PRO181) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d1ar91_ : (SER76) (PRO181) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d1aym1_ : (SER66) (SER162) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus 16, (HRV-16) [TaxId: 31708]
d1pov1_ : (SER76) (PRO181) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121