Protein Concepts Dictionary

Tableau information

Concept source:  d2ac0b_  amino acid (a.a.) range (CYS176)(LEU289)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: HEEEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (CYS176)  (CYS182) H1
	  (LEU194)  (GLY199) E2
	  (ARG202)  (ASP208) E3
	  (SER215)  (PRO223) E4
	  (CYS229)  (CYS238) E5
	  (CYS242)  (ASN247) H6
	  (PRO250)  (THR256) E7
	  (LEU265)  (CYS275) E8
	  (PRO278)  (LEU289) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                             
E2       33.3°   E2                                                      
E3     -141.3°  165.3°   E3                                               
E4       64.4°   31.3°  146.2°   E4                                        
E5      111.7°  139.4°  -49.3°  159.0°   E5                                 
H6     -115.2°  -96.2°   74.5°  -73.2°  123.7°   H6                          
E7      -52.6°  -45.9°  119.5°  -50.8°  144.9°   62.7°   E7                   
E8      100.5°  109.6°  -84.0°  117.3°  -41.8° -143.0°  152.6°   E8            
H9     -150.2° -122.3°   55.6°  -91.9°   96.8°  -36.4°  -98.8°  106.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3exjb_ :   (CYS173)  (ARG287)   [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1gzhc_ :   (CYS176)  (LEU289)   [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |p53 tumor suppressor, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
 d3exja_ :   (CYS173)  (VAL291)   [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1kzya_ :   (CYS176)  (LEU289)   [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |p53 tumor suppressor, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
 d3exla_ :   (CYS173)  (LYS288)   [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.2