Tableau information
Concept source: d1i4ki_ amino acid (a.a.) range (LEU6)(PRO72)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU6) (LEU13) H1
(VAL17) (LYS22) E2
(ARG25) (GLY29) E3
(ASP32) (ILE36) E4
(LEU40) (ASP44) E5
(ASP44) (ASN50) E6
(VAL54) (GLY58) E7
(GLY58) (ARG63) E8
(VAL68) (PRO72) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -132.1° E2
E3 -50.1° 162.4° E3
E4 -166.3° 50.7° -122.3° E4
E5 22.9° -121.7° 66.9° -170.1° E5
E6 121.3° -45.0° 152.5° -70.9° 99.2° E6
E7 -71.3° 129.4° -33.4° 96.8° -93.1° 167.2° E7
E8 -170.0° 47.6° -126.3° -4.5° 165.6° 66.4° 101.3° E8
E9 43.7° 166.8° -30.1° -137.3° 48.6° 123.2° -63.5° -139.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1i81d_ : (ASP16) (PRO81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1jbmb_ : (ASP16) (GLY82) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1m5qa_ : (PHE12) (GLU77) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Sm-Like archaeal protein Smap3 |Pyrobaculum aerophilum [TaxId: 13773]
d1i8fe_ : (THR11) (PRO78) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1i4ki_ : (LEU6) (PRO72) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]
d1h641_ : (LEU6) (THR73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrococcus abyssi [TaxId: 29292]
d1lojk_ : (PRO14) (ARG81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d4n0aa_ : (PRO4) (SER80) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3swna_ : (LEU8) (PRO75) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
d1loje_ : (PRO14) (LEU84) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d4emkb_ : (SER4) (LEU73) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
d1i8fg_ : (ALA14) (PRO78) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1i81f_ : (ASP16) (PRO81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1i8ff_ : (CYS8) (GLY81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1i8fb_ : (PHE9) (PRO78) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1jbmd_ : (PRO14) (ARG81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1i8fc_ : (ALA14) (GLY81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1i81a_ : (ASP16) (PRO81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1jrig_ : (ASP16) (GLY82) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1i5lc_ : (LEU6) (PRO72) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]
d1lojd_ : (ARG13) (ARG81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1i4ka_ : (LEU6) (PRO72) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]
d3s6nf_ : (PRO7) (GLU76) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i5li_ : (ARG4) (ALA73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]
d1i4kc_ : (LEU6) (ALA73) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]
d1m8va_ : (ARG104) (THR173) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrococcus abyssi [TaxId: 29292]
d1i5lb_ : (ARG4) (PRO72) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]
d1lnxb_ : (THR11) (PRO78) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1i4k1_ : (PRO5) (PRO72) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm1 [TaxId: 2234]
d1ljoa_ : (PRO6) (PRO74) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Archaeoglobus fulgidus, AF-Sm2 [TaxId: 2234]
d1i8fa_ : (THR11) (PRO78) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1jria_ : (ARG13) (ARG81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1i8fd_ : (PHE9) (PRO78) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Pyrobaculum aerophilum [TaxId: 13773]
d1jbmf_ : (PRO14) (ARG81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1lojh_ : (PRO14) (ARG81) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1jbmc_ : (ASP16) (LEU84) [view usage] : b.38.1.1 |Sm-like fold |Sm-like ribonucleoproteins |Sm motif of small nuclear ribonucleoproteins, SNRNP |Archaeal homoheptameric Sm protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.38