Protein Concepts Dictionary

Tableau information

Concept source:  d4haia1  amino acid (a.a.) range (ARG4)(ASN124)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHHHHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG4)    (ASP9) E1
	   (LEU10)   (ALA15) H2
	   (VAL19)   (ALA31) H3
	   (LEU36)   (GLN42) H4
	   (THR50)   (GLY56) H5
	   (THR59)   (THR77) H6
	   (SER87)   (ARG99) H7
	  (ARG103)  (GLY116) H8
	  (THR118)  (ASN124) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2     -106.1°   H2                                                      
H3       25.7°  -95.4°   H3                                               
H4      113.1°  123.7°  135.2°   H4                                        
H5      134.7°   62.0°  148.1°  -61.8°   H5                                 
H6      -58.9° -109.5°  -39.8°  124.9° -164.2°   H6                          
H7      147.8°   42.2°  130.4°  -94.5°  -45.7°  118.7°   H7                   
H8     -157.0°  -90.1°  171.0°  -44.0°  -40.7°  131.4°  -51.9°   H8            
E9      -21.6° -126.5°   34.4°  100.8°  145.6°   50.2°  164.7°  142.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3i1ya1 :     (ARG4)  (ASN124)   [view usage] : c.108.1.2 |HAD-like |HAD-like |YihX-like |Epoxide hydrolase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1vj5a1 :     (ARG4)  (ASN124)   [view usage] : c.108.1.2 |HAD-like |HAD-like |YihX-like |Epoxide hydrolase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1s8oa1 :     (ARG4)  (ASN124)   [view usage] : c.108.1.2 |HAD-like |HAD-like |YihX-like |Epoxide hydrolase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1cqzb1 :     (ARG4)  (ASN124)   [view usage] : c.108.1.2 |HAD-like |HAD-like |YihX-like |Epoxide hydrolase, N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
 d4haia1 :     (ARG4)  (ASN124)   [view usage] : c.108.1.2 |HAD-like |HAD-like |YihX-like |Epoxide hydrolase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108