Protein Concepts Dictionary

Tableau information

Concept source:  d1zbya_  amino acid (a.a.) range (LEU4)(LEU177)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHHHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU4)   (VAL10) E1
	   (SER15)   (GLU32) H2
	   (TYR42)   (SER54) H3
	   (PHE73)   (ASP79) H4
	   (ALA83)   (PHE99) H5
	  (SER103)  (GLN120) H6
	  (PRO122)  (PRO134) E7
	  (ASP150)  (ASN162) H8
	  (ASN164)  (LEU177) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2       91.4°   H2                                                      
H3     -136.0°  131.7°   H3                                               
H4      -94.4°  -43.9°  121.7°   H4                                        
H5       42.8°  128.3°  -94.4°  134.9°   H5                                 
H6      -65.2°  -59.9° -138.4°  -31.3°  103.7°   H6                          
E7      114.7°  103.0°   54.9°  138.0°  -83.6°  162.5°   E7                   
H8      -69.3°  148.4°   68.1° -155.9°  -26.6° -125.9°   66.1°   H8            
H9       55.6°  -44.4° -148.5°  -77.7°   84.4°   71.5°  -93.8°  104.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1u74c_ :     (PRO3)  (LEU177)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1bvaa_ :     (LEU4)  (LEU177)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1beqa_ :     (LEU4)  (LEU177)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2v23a_ :     (LEU4)  (LEU177)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1u74a_ :     (PRO3)  (LEU177)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1kxma_ :     (LEU4)  (LEU177)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93